Gene : Carub.0006s3448 C. rubella v1.1
Defline:  (1 of 2) PTHR22951//PTHR22951:SF12 - CLATHRIN ASSEMBLY PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  3448
Name:  ? Carub.0006s3448 Secondary Identifier:  ? PAC:39249296
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3448 0.5kb upstream 0.5kb upstream 2767 true scaffold_6: 15521409-15524175 Capsella rubella
Carub.0006s3448 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 15523676-15524175 Capsella rubella
Carub.0006s3448 0.5kb downstream 0.5kb downstream 2767 true scaffold_6: 15520909-15523675 Capsella rubella
Carub.0006s3448 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 15520909-15521408 Capsella rubella
Carub.0006s3448 1.0kb upstream 1.0kb upstream 3267 true scaffold_6: 15521409-15524675 Capsella rubella
Carub.0006s3448 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 15523676-15524675 Capsella rubella
Carub.0006s3448 1.0kb downstream 1.0kb downstream 3267 true scaffold_6: 15520409-15523675 Capsella rubella
Carub.0006s3448 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 15520409-15521408 Capsella rubella
Carub.0006s3448 2.0kb upstream 2.0kb upstream 4267 true scaffold_6: 15521409-15525675 Capsella rubella
Carub.0006s3448 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 15523676-15525675 Capsella rubella
Carub.0006s3448 2.0kb downstream 2.0kb downstream 4267 true scaffold_6: 15519409-15523675 Capsella rubella
Carub.0006s3448 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 15519409-15521408 Capsella rubella
Carub.0006s3448 5.0kb upstream 5.0kb upstream 7267 true scaffold_6: 15521409-15528675 Capsella rubella
Carub.0006s3448 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 15523676-15528675 Capsella rubella
Carub.0006s3448 5.0kb downstream 5.0kb downstream 7267 true scaffold_6: 15516409-15523675 Capsella rubella
Carub.0006s3448 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 15516409-15521408 Capsella rubella
Carub.0006s3448 10.0kb upstream 10.0kb upstream 12267 true scaffold_6: 15521409-15533675 Capsella rubella
Carub.0006s3448 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 15523676-15533675 Capsella rubella
Carub.0006s3448 10.0kb downstream 10.0kb downstream 12267 true scaffold_6: 15511409-15523675 Capsella rubella
Carub.0006s3448 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 15511409-15521408 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362454 5261 Brassicaceae View MSA
123841635 5264 Brassicales-Malvales View MSA
124343471 5266 SBM View MSA
124241915 5268 Malvidae View MSA
124066934 5270 Rosid View MSA
123739341 5271 Pentapetalae View MSA
122788140 5272 Eudicot View MSA
122050548 5273 Angiosperm View MSA
123428889 5275 Viridiplantae View MSA
121311984 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain