Gene : Carub.0006s3463 C. rubella v1.1
Defline:  (1 of 5) K08238 - xyloglucan 6-xylosyltransferase [EC:2.4.2.39] Xyl a1-6 Glc (XXT) Genomic Order:  3463
Name:  ? Carub.0006s3463 Secondary Identifier:  ? PAC:39247461
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5936 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3463 0.5kb upstream 0.5kb upstream 2744 true scaffold_6: 15573057-15575800 Capsella rubella
Carub.0006s3463 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 15575301-15575800 Capsella rubella
Carub.0006s3463 0.5kb downstream 0.5kb downstream 2744 true scaffold_6: 15572557-15575300 Capsella rubella
Carub.0006s3463 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 15572557-15573056 Capsella rubella
Carub.0006s3463 1.0kb upstream 1.0kb upstream 3244 true scaffold_6: 15573057-15576300 Capsella rubella
Carub.0006s3463 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 15575301-15576300 Capsella rubella
Carub.0006s3463 1.0kb downstream 1.0kb downstream 3244 true scaffold_6: 15572057-15575300 Capsella rubella
Carub.0006s3463 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 15572057-15573056 Capsella rubella
Carub.0006s3463 2.0kb upstream 2.0kb upstream 4244 true scaffold_6: 15573057-15577300 Capsella rubella
Carub.0006s3463 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 15575301-15577300 Capsella rubella
Carub.0006s3463 2.0kb downstream 2.0kb downstream 4244 true scaffold_6: 15571057-15575300 Capsella rubella
Carub.0006s3463 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 15571057-15573056 Capsella rubella
Carub.0006s3463 5.0kb upstream 5.0kb upstream 7244 true scaffold_6: 15573057-15580300 Capsella rubella
Carub.0006s3463 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 15575301-15580300 Capsella rubella
Carub.0006s3463 5.0kb downstream 5.0kb downstream 7244 true scaffold_6: 15568057-15575300 Capsella rubella
Carub.0006s3463 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 15568057-15573056 Capsella rubella
Carub.0006s3463 10.0kb upstream 10.0kb upstream 12244 true scaffold_6: 15573057-15585300 Capsella rubella
Carub.0006s3463 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 15575301-15585300 Capsella rubella
Carub.0006s3463 10.0kb downstream 10.0kb downstream 12244 true scaffold_6: 15563057-15575300 Capsella rubella
Carub.0006s3463 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 15563057-15573056 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378402 5261 Brassicaceae View MSA
123833472 5264 Brassicales-Malvales View MSA
124339455 5266 SBM View MSA
124245005 5268 Malvidae View MSA
124064369 5270 Rosid View MSA
123736946 5271 Pentapetalae View MSA
122789380 5272 Eudicot View MSA
122042255 5273 Angiosperm View MSA
121349054 5274 Embryophyte View MSA
123428220 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain