Gene : Carub.0006s1581 C. rubella v1.1
Defline:  (1 of 1) PTHR10060:SF24 - DEOXYRIBONUCLEASE TATDN3-RELATED Genomic Order:  1581
Name:  ? Carub.0006s1581 Secondary Identifier:  ? PAC:39247676
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1581 0.5kb upstream 0.5kb upstream 2336 true scaffold_6: 5845804-5848139 Capsella rubella
Carub.0006s1581 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 5845804-5846303 Capsella rubella
Carub.0006s1581 0.5kb downstream 0.5kb downstream 2336 true scaffold_6: 5846304-5848639 Capsella rubella
Carub.0006s1581 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 5848140-5848639 Capsella rubella
Carub.0006s1581 1.0kb upstream 1.0kb upstream 2836 true scaffold_6: 5845304-5848139 Capsella rubella
Carub.0006s1581 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 5845304-5846303 Capsella rubella
Carub.0006s1581 1.0kb downstream 1.0kb downstream 2836 true scaffold_6: 5846304-5849139 Capsella rubella
Carub.0006s1581 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 5848140-5849139 Capsella rubella
Carub.0006s1581 2.0kb upstream 2.0kb upstream 3836 true scaffold_6: 5844304-5848139 Capsella rubella
Carub.0006s1581 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 5844304-5846303 Capsella rubella
Carub.0006s1581 2.0kb downstream 2.0kb downstream 3836 true scaffold_6: 5846304-5850139 Capsella rubella
Carub.0006s1581 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 5848140-5850139 Capsella rubella
Carub.0006s1581 5.0kb upstream 5.0kb upstream 6836 true scaffold_6: 5841304-5848139 Capsella rubella
Carub.0006s1581 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 5841304-5846303 Capsella rubella
Carub.0006s1581 5.0kb downstream 5.0kb downstream 6836 true scaffold_6: 5846304-5853139 Capsella rubella
Carub.0006s1581 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 5848140-5853139 Capsella rubella
Carub.0006s1581 10.0kb upstream 10.0kb upstream 11836 true scaffold_6: 5836304-5848139 Capsella rubella
Carub.0006s1581 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 5836304-5846303 Capsella rubella
Carub.0006s1581 10.0kb downstream 10.0kb downstream 11836 true scaffold_6: 5846304-5858139 Capsella rubella
Carub.0006s1581 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 5848140-5858139 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362117 5261 Brassicaceae View MSA
123831019 5264 Brassicales-Malvales View MSA
124343445 5266 SBM View MSA
124238522 5268 Malvidae View MSA
124061063 5270 Rosid View MSA
123739501 5271 Pentapetalae View MSA
122793649 5272 Eudicot View MSA
122041796 5273 Angiosperm View MSA
121347272 5274 Embryophyte View MSA
123428718 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain