Gene : Carub.0006s3476 C. rubella v1.1

Defline:  (1 of 2) K14567 - U3 small nucleolar RNA-associated protein 14 (UTP14) Genomic Order:  3476
Name:  ? Carub.0006s3476 Secondary Identifier:  ? PAC:39249850

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s3476 0.5kb upstream 0.5kb upstream 4383 true scaffold_6: 15625450-15629832 Capsella rubella
Carub.0006s3476 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 15629333-15629832 Capsella rubella
Carub.0006s3476 0.5kb downstream 0.5kb downstream 4383 true scaffold_6: 15624950-15629332 Capsella rubella
Carub.0006s3476 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 15624950-15625449 Capsella rubella
Carub.0006s3476 1.0kb upstream 1.0kb upstream 4883 true scaffold_6: 15625450-15630332 Capsella rubella
Carub.0006s3476 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 15629333-15630332 Capsella rubella
Carub.0006s3476 1.0kb downstream 1.0kb downstream 4883 true scaffold_6: 15624450-15629332 Capsella rubella
Carub.0006s3476 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 15624450-15625449 Capsella rubella
Carub.0006s3476 2.0kb upstream 2.0kb upstream 5883 true scaffold_6: 15625450-15631332 Capsella rubella
Carub.0006s3476 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 15629333-15631332 Capsella rubella
Carub.0006s3476 2.0kb downstream 2.0kb downstream 5883 true scaffold_6: 15623450-15629332 Capsella rubella
Carub.0006s3476 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 15623450-15625449 Capsella rubella
Carub.0006s3476 5.0kb upstream 5.0kb upstream 8883 true scaffold_6: 15625450-15634332 Capsella rubella
Carub.0006s3476 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 15629333-15634332 Capsella rubella
Carub.0006s3476 5.0kb downstream 5.0kb downstream 8883 true scaffold_6: 15620450-15629332 Capsella rubella
Carub.0006s3476 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 15620450-15625449 Capsella rubella
Carub.0006s3476 10.0kb upstream 10.0kb upstream 13883 true scaffold_6: 15625450-15639332 Capsella rubella
Carub.0006s3476 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 15629333-15639332 Capsella rubella
Carub.0006s3476 10.0kb downstream 10.0kb downstream 13883 true scaffold_6: 15615450-15629332 Capsella rubella
Carub.0006s3476 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 15615450-15625449 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371546 5261 Brassicaceae View MSA
123833119 5264 Brassicales-Malvales View MSA
124337304 5266 SBM View MSA
124241342 5268 Malvidae View MSA
124066027 5270 Rosid View MSA
123741569 5271 Pentapetalae View MSA
122789382 5272 Eudicot View MSA
122043501 5273 Angiosperm View MSA
121349819 5274 Embryophyte View MSA
123425174 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain