Gene : Carub.0006s1723 C. rubella v1.1
Defline:  (1 of 1) PTHR11570//PTHR11570:SF1 - S-ADENOSYLMETHIONINE DECARBOXYLASE // S-ADENOSYLMETHIONINE DECARBOXYLASE PROENZYME Genomic Order:  1723
Name:  ? Carub.0006s1723 Secondary Identifier:  ? PAC:39247009
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella ARGSPECAT-PWY Capsella rubella pathologic  
Crubella BSUBPOLYAMSYN-PWY Capsella rubella pathologic  
Crubella PWY-7528 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1723 0.5kb upstream 0.5kb upstream 2096 true scaffold_6: 6361083-6363178 Capsella rubella
Carub.0006s1723 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 6362679-6363178 Capsella rubella
Carub.0006s1723 0.5kb downstream 0.5kb downstream 2096 true scaffold_6: 6360583-6362678 Capsella rubella
Carub.0006s1723 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 6360583-6361082 Capsella rubella
Carub.0006s1723 1.0kb upstream 1.0kb upstream 2596 true scaffold_6: 6361083-6363678 Capsella rubella
Carub.0006s1723 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 6362679-6363678 Capsella rubella
Carub.0006s1723 1.0kb downstream 1.0kb downstream 2596 true scaffold_6: 6360083-6362678 Capsella rubella
Carub.0006s1723 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 6360083-6361082 Capsella rubella
Carub.0006s1723 2.0kb upstream 2.0kb upstream 3596 true scaffold_6: 6361083-6364678 Capsella rubella
Carub.0006s1723 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 6362679-6364678 Capsella rubella
Carub.0006s1723 2.0kb downstream 2.0kb downstream 3596 true scaffold_6: 6359083-6362678 Capsella rubella
Carub.0006s1723 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 6359083-6361082 Capsella rubella
Carub.0006s1723 5.0kb upstream 5.0kb upstream 6596 true scaffold_6: 6361083-6367678 Capsella rubella
Carub.0006s1723 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 6362679-6367678 Capsella rubella
Carub.0006s1723 5.0kb downstream 5.0kb downstream 6596 true scaffold_6: 6356083-6362678 Capsella rubella
Carub.0006s1723 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 6356083-6361082 Capsella rubella
Carub.0006s1723 10.0kb upstream 10.0kb upstream 11596 true scaffold_6: 6361083-6372678 Capsella rubella
Carub.0006s1723 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 6362679-6372678 Capsella rubella
Carub.0006s1723 10.0kb downstream 10.0kb downstream 11596 true scaffold_6: 6351083-6362678 Capsella rubella
Carub.0006s1723 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 6351083-6361082 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370736 5261 Brassicaceae View MSA
123835642 5264 Brassicales-Malvales View MSA
124338711 5266 SBM View MSA
124250862 5268 Malvidae View MSA
124061070 5270 Rosid View MSA
123751266 5271 Pentapetalae View MSA
122795098 5272 Eudicot View MSA
122049143 5273 Angiosperm View MSA
121348944 5274 Embryophyte View MSA
123423800 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain