Gene : Carub.0006s1736 C. rubella v1.1
Defline:  (1 of 3) PTHR11088:SF30 - ADENYLATE ISOPENTENYLTRANSFERASE 3, CHLOROPLASTIC Genomic Order:  1736
Name:  ? Carub.0006s1736 Secondary Identifier:  ? PAC:39246763
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-2681 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

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Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1736 0.5kb upstream 0.5kb upstream 1493 true scaffold_6: 6411899-6413391 Capsella rubella
Carub.0006s1736 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 6412892-6413391 Capsella rubella
Carub.0006s1736 0.5kb downstream 0.5kb downstream 1493 true scaffold_6: 6411399-6412891 Capsella rubella
Carub.0006s1736 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 6411399-6411898 Capsella rubella
Carub.0006s1736 1.0kb upstream 1.0kb upstream 1993 true scaffold_6: 6411899-6413891 Capsella rubella
Carub.0006s1736 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 6412892-6413891 Capsella rubella
Carub.0006s1736 1.0kb downstream 1.0kb downstream 1993 true scaffold_6: 6410899-6412891 Capsella rubella
Carub.0006s1736 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 6410899-6411898 Capsella rubella
Carub.0006s1736 2.0kb upstream 2.0kb upstream 2993 true scaffold_6: 6411899-6414891 Capsella rubella
Carub.0006s1736 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 6412892-6414891 Capsella rubella
Carub.0006s1736 2.0kb downstream 2.0kb downstream 2993 true scaffold_6: 6409899-6412891 Capsella rubella
Carub.0006s1736 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 6409899-6411898 Capsella rubella
Carub.0006s1736 5.0kb upstream 5.0kb upstream 5993 true scaffold_6: 6411899-6417891 Capsella rubella
Carub.0006s1736 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 6412892-6417891 Capsella rubella
Carub.0006s1736 5.0kb downstream 5.0kb downstream 5993 true scaffold_6: 6406899-6412891 Capsella rubella
Carub.0006s1736 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 6406899-6411898 Capsella rubella
Carub.0006s1736 10.0kb upstream 10.0kb upstream 10993 true scaffold_6: 6411899-6422891 Capsella rubella
Carub.0006s1736 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 6412892-6422891 Capsella rubella
Carub.0006s1736 10.0kb downstream 10.0kb downstream 10993 true scaffold_6: 6401899-6412891 Capsella rubella
Carub.0006s1736 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 6401899-6411898 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371498 5261 Brassicaceae View MSA
123829892 5264 Brassicales-Malvales View MSA
124338029 5266 SBM View MSA
124243543 5268 Malvidae View MSA
124067788 5270 Rosid View MSA
123742235 5271 Pentapetalae View MSA
122793817 5272 Eudicot View MSA
122042275 5273 Angiosperm View MSA
121309945 5274 Embryophyte View MSA
123428607 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain