Gene : Carub.0006s1727 C. rubella v1.1
Defline:  (1 of 1) PTHR33294:SF3 - AWPM-19-LIKE PROTEIN Genomic Order:  1727
Name:  ? Carub.0006s1727 Secondary Identifier:  ? PAC:39246510
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1727 0.5kb upstream 0.5kb upstream 1640 true scaffold_6: 6385281-6386920 Capsella rubella
Carub.0006s1727 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 6386421-6386920 Capsella rubella
Carub.0006s1727 0.5kb downstream 0.5kb downstream 1640 true scaffold_6: 6384781-6386420 Capsella rubella
Carub.0006s1727 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 6384781-6385280 Capsella rubella
Carub.0006s1727 1.0kb upstream 1.0kb upstream 2140 true scaffold_6: 6385281-6387420 Capsella rubella
Carub.0006s1727 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 6386421-6387420 Capsella rubella
Carub.0006s1727 1.0kb downstream 1.0kb downstream 2140 true scaffold_6: 6384281-6386420 Capsella rubella
Carub.0006s1727 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 6384281-6385280 Capsella rubella
Carub.0006s1727 2.0kb upstream 2.0kb upstream 3140 true scaffold_6: 6385281-6388420 Capsella rubella
Carub.0006s1727 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 6386421-6388420 Capsella rubella
Carub.0006s1727 2.0kb downstream 2.0kb downstream 3140 true scaffold_6: 6383281-6386420 Capsella rubella
Carub.0006s1727 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 6383281-6385280 Capsella rubella
Carub.0006s1727 5.0kb upstream 5.0kb upstream 6140 true scaffold_6: 6385281-6391420 Capsella rubella
Carub.0006s1727 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 6386421-6391420 Capsella rubella
Carub.0006s1727 5.0kb downstream 5.0kb downstream 6140 true scaffold_6: 6380281-6386420 Capsella rubella
Carub.0006s1727 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 6380281-6385280 Capsella rubella
Carub.0006s1727 10.0kb upstream 10.0kb upstream 11140 true scaffold_6: 6385281-6396420 Capsella rubella
Carub.0006s1727 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 6386421-6396420 Capsella rubella
Carub.0006s1727 10.0kb downstream 10.0kb downstream 11140 true scaffold_6: 6375281-6386420 Capsella rubella
Carub.0006s1727 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 6375281-6385280 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368605 5261 Brassicaceae View MSA
123840314 5264 Brassicales-Malvales View MSA
124345567 5266 SBM View MSA
124238114 5268 Malvidae View MSA
124066796 5270 Rosid View MSA
123736510 5271 Pentapetalae View MSA
122792358 5272 Eudicot View MSA
122050396 5273 Angiosperm View MSA
121349282 5274 Embryophyte View MSA
123381254 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain