Gene : Carub.0006s1726 C. rubella v1.1
Defline:  (1 of 2) PTHR31669:SF38 - PROTEIN FAR1-RELATED SEQUENCE 12-RELATED Genomic Order:  1726
Name:  ? Carub.0006s1726 Secondary Identifier:  ? PAC:39247506
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1726 0.5kb upstream 0.5kb upstream 3849 true scaffold_6: 6379309-6383157 Capsella rubella
Carub.0006s1726 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 6379309-6379808 Capsella rubella
Carub.0006s1726 0.5kb downstream 0.5kb downstream 3849 true scaffold_6: 6379809-6383657 Capsella rubella
Carub.0006s1726 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 6383158-6383657 Capsella rubella
Carub.0006s1726 1.0kb upstream 1.0kb upstream 4349 true scaffold_6: 6378809-6383157 Capsella rubella
Carub.0006s1726 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 6378809-6379808 Capsella rubella
Carub.0006s1726 1.0kb downstream 1.0kb downstream 4349 true scaffold_6: 6379809-6384157 Capsella rubella
Carub.0006s1726 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 6383158-6384157 Capsella rubella
Carub.0006s1726 2.0kb upstream 2.0kb upstream 5349 true scaffold_6: 6377809-6383157 Capsella rubella
Carub.0006s1726 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 6377809-6379808 Capsella rubella
Carub.0006s1726 2.0kb downstream 2.0kb downstream 5349 true scaffold_6: 6379809-6385157 Capsella rubella
Carub.0006s1726 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 6383158-6385157 Capsella rubella
Carub.0006s1726 5.0kb upstream 5.0kb upstream 8349 true scaffold_6: 6374809-6383157 Capsella rubella
Carub.0006s1726 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 6374809-6379808 Capsella rubella
Carub.0006s1726 5.0kb downstream 5.0kb downstream 8349 true scaffold_6: 6379809-6388157 Capsella rubella
Carub.0006s1726 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 6383158-6388157 Capsella rubella
Carub.0006s1726 10.0kb upstream 10.0kb upstream 13349 true scaffold_6: 6369809-6383157 Capsella rubella
Carub.0006s1726 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 6369809-6379808 Capsella rubella
Carub.0006s1726 10.0kb downstream 10.0kb downstream 13349 true scaffold_6: 6379809-6393157 Capsella rubella
Carub.0006s1726 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 6383158-6393157 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366498 5261 Brassicaceae View MSA
123840136 5264 Brassicales-Malvales View MSA
124336771 5266 SBM View MSA
124238441 5268 Malvidae View MSA
124069128 5270 Rosid View MSA
123739039 5271 Pentapetalae View MSA
122769944 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain