Gene : Carub.0006s1883 C. rubella v1.1
Defline:  (1 of 1) PTHR10168//PTHR10168:SF112 - GLUTAREDOXIN // GLUTAREDOXIN-C4 Genomic Order:  1883
Name:  ? Carub.0006s1883 Secondary Identifier:  ? PAC:39247023
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella THIOREDOX-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1883 0.5kb upstream 0.5kb upstream 1815 true scaffold_6: 6954993-6956807 Capsella rubella
Carub.0006s1883 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 6954993-6955492 Capsella rubella
Carub.0006s1883 0.5kb downstream 0.5kb downstream 1815 true scaffold_6: 6955493-6957307 Capsella rubella
Carub.0006s1883 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 6956808-6957307 Capsella rubella
Carub.0006s1883 1.0kb upstream 1.0kb upstream 2315 true scaffold_6: 6954493-6956807 Capsella rubella
Carub.0006s1883 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 6954493-6955492 Capsella rubella
Carub.0006s1883 1.0kb downstream 1.0kb downstream 2315 true scaffold_6: 6955493-6957807 Capsella rubella
Carub.0006s1883 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 6956808-6957807 Capsella rubella
Carub.0006s1883 2.0kb upstream 2.0kb upstream 3315 true scaffold_6: 6953493-6956807 Capsella rubella
Carub.0006s1883 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 6953493-6955492 Capsella rubella
Carub.0006s1883 2.0kb downstream 2.0kb downstream 3315 true scaffold_6: 6955493-6958807 Capsella rubella
Carub.0006s1883 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 6956808-6958807 Capsella rubella
Carub.0006s1883 5.0kb upstream 5.0kb upstream 6315 true scaffold_6: 6950493-6956807 Capsella rubella
Carub.0006s1883 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 6950493-6955492 Capsella rubella
Carub.0006s1883 5.0kb downstream 5.0kb downstream 6315 true scaffold_6: 6955493-6961807 Capsella rubella
Carub.0006s1883 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 6956808-6961807 Capsella rubella
Carub.0006s1883 10.0kb upstream 10.0kb upstream 11315 true scaffold_6: 6945493-6956807 Capsella rubella
Carub.0006s1883 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 6945493-6955492 Capsella rubella
Carub.0006s1883 10.0kb downstream 10.0kb downstream 11315 true scaffold_6: 6955493-6966807 Capsella rubella
Carub.0006s1883 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 6956808-6966807 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364139 5261 Brassicaceae View MSA
123830349 5264 Brassicales-Malvales View MSA
124321666 5266 SBM View MSA
124251617 5268 Malvidae View MSA
124064046 5270 Rosid View MSA
123741506 5271 Pentapetalae View MSA
122793687 5272 Eudicot View MSA
122043796 5273 Angiosperm View MSA
121344746 5274 Embryophyte View MSA
123428660 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain