Gene : Carub.0006s2125 C. rubella v1.1
Defline:  (1 of 1) PTHR12358:SF33 - ACYLGLYCEROL KINASE, MITOCHONDRIAL Genomic Order:  2125
Name:  ? Carub.0006s2125 Secondary Identifier:  ? PAC:39246648
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5129 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s2125 0.5kb upstream 0.5kb upstream 5362 true scaffold_6: 7954683-7960044 Capsella rubella
Carub.0006s2125 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 7959545-7960044 Capsella rubella
Carub.0006s2125 0.5kb downstream 0.5kb downstream 5362 true scaffold_6: 7954183-7959544 Capsella rubella
Carub.0006s2125 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 7954183-7954682 Capsella rubella
Carub.0006s2125 1.0kb upstream 1.0kb upstream 5862 true scaffold_6: 7954683-7960544 Capsella rubella
Carub.0006s2125 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 7959545-7960544 Capsella rubella
Carub.0006s2125 1.0kb downstream 1.0kb downstream 5862 true scaffold_6: 7953683-7959544 Capsella rubella
Carub.0006s2125 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 7953683-7954682 Capsella rubella
Carub.0006s2125 2.0kb upstream 2.0kb upstream 6862 true scaffold_6: 7954683-7961544 Capsella rubella
Carub.0006s2125 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 7959545-7961544 Capsella rubella
Carub.0006s2125 2.0kb downstream 2.0kb downstream 6862 true scaffold_6: 7952683-7959544 Capsella rubella
Carub.0006s2125 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 7952683-7954682 Capsella rubella
Carub.0006s2125 5.0kb upstream 5.0kb upstream 9862 true scaffold_6: 7954683-7964544 Capsella rubella
Carub.0006s2125 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 7959545-7964544 Capsella rubella
Carub.0006s2125 5.0kb downstream 5.0kb downstream 9862 true scaffold_6: 7949683-7959544 Capsella rubella
Carub.0006s2125 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 7949683-7954682 Capsella rubella
Carub.0006s2125 10.0kb upstream 10.0kb upstream 14862 true scaffold_6: 7954683-7969544 Capsella rubella
Carub.0006s2125 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 7959545-7969544 Capsella rubella
Carub.0006s2125 10.0kb downstream 10.0kb downstream 14862 true scaffold_6: 7944683-7959544 Capsella rubella
Carub.0006s2125 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 7944683-7954682 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363319 5261 Brassicaceae View MSA
123836450 5264 Brassicales-Malvales View MSA
124345813 5266 SBM View MSA
124254227 5268 Malvidae View MSA
124074924 5270 Rosid View MSA
123752126 5271 Pentapetalae View MSA
122793643 5272 Eudicot View MSA
122046814 5273 Angiosperm View MSA
121349004 5274 Embryophyte View MSA
123428396 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain