Gene : Carub.0006s2139 C. rubella v1.1

Defline:  (1 of 1) K14950 - cation-transporting ATPase 13A1 (ATP13A1) Genomic Order:  2139
Name:  ? Carub.0006s2139 Secondary Identifier:  ? PAC:39248923

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s2139 0.5kb upstream 0.5kb upstream 8000 true scaffold_6: 8009677-8017676 Capsella rubella
Carub.0006s2139 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 8017177-8017676 Capsella rubella
Carub.0006s2139 0.5kb downstream 0.5kb downstream 8000 true scaffold_6: 8009177-8017176 Capsella rubella
Carub.0006s2139 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 8009177-8009676 Capsella rubella
Carub.0006s2139 1.0kb upstream 1.0kb upstream 8500 true scaffold_6: 8009677-8018176 Capsella rubella
Carub.0006s2139 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 8017177-8018176 Capsella rubella
Carub.0006s2139 1.0kb downstream 1.0kb downstream 8500 true scaffold_6: 8008677-8017176 Capsella rubella
Carub.0006s2139 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 8008677-8009676 Capsella rubella
Carub.0006s2139 2.0kb upstream 2.0kb upstream 9500 true scaffold_6: 8009677-8019176 Capsella rubella
Carub.0006s2139 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 8017177-8019176 Capsella rubella
Carub.0006s2139 2.0kb downstream 2.0kb downstream 9500 true scaffold_6: 8007677-8017176 Capsella rubella
Carub.0006s2139 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 8007677-8009676 Capsella rubella
Carub.0006s2139 5.0kb upstream 5.0kb upstream 12500 true scaffold_6: 8009677-8022176 Capsella rubella
Carub.0006s2139 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 8017177-8022176 Capsella rubella
Carub.0006s2139 5.0kb downstream 5.0kb downstream 12500 true scaffold_6: 8004677-8017176 Capsella rubella
Carub.0006s2139 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 8004677-8009676 Capsella rubella
Carub.0006s2139 10.0kb upstream 10.0kb upstream 17500 true scaffold_6: 8009677-8027176 Capsella rubella
Carub.0006s2139 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 8017177-8027176 Capsella rubella
Carub.0006s2139 10.0kb downstream 10.0kb downstream 17500 true scaffold_6: 7999677-8017176 Capsella rubella
Carub.0006s2139 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 7999677-8009676 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026494 5273 Angiosperm View MSA
122362774 5261 Brassicaceae View MSA
123830865 5264 Brassicales-Malvales View MSA
124344881 5266 SBM View MSA
124250133 5268 Malvidae View MSA
124068508 5270 Rosid View MSA
123739596 5271 Pentapetalae View MSA
122790607 5272 Eudicot View MSA
121344570 5274 Embryophyte View MSA
123424459 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain