Gene : Carub.0006s2141 C. rubella v1.1
Defline:  (1 of 4) PTHR10791//PTHR10791:SF65 - RAG1-ACTIVATING PROTEIN 1 // BIDIRECTIONAL SUGAR TRANSPORTER SWEET11-RELATED Genomic Order:  2141
Name:  ? Carub.0006s2141 Secondary Identifier:  ? PAC:39247137
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s2141 0.5kb upstream 0.5kb upstream 2531 true scaffold_6: 8021201-8023731 Capsella rubella
Carub.0006s2141 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 8023232-8023731 Capsella rubella
Carub.0006s2141 0.5kb downstream 0.5kb downstream 2531 true scaffold_6: 8020701-8023231 Capsella rubella
Carub.0006s2141 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 8020701-8021200 Capsella rubella
Carub.0006s2141 1.0kb upstream 1.0kb upstream 3031 true scaffold_6: 8021201-8024231 Capsella rubella
Carub.0006s2141 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 8023232-8024231 Capsella rubella
Carub.0006s2141 1.0kb downstream 1.0kb downstream 3031 true scaffold_6: 8020201-8023231 Capsella rubella
Carub.0006s2141 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 8020201-8021200 Capsella rubella
Carub.0006s2141 2.0kb upstream 2.0kb upstream 4031 true scaffold_6: 8021201-8025231 Capsella rubella
Carub.0006s2141 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 8023232-8025231 Capsella rubella
Carub.0006s2141 2.0kb downstream 2.0kb downstream 4031 true scaffold_6: 8019201-8023231 Capsella rubella
Carub.0006s2141 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 8019201-8021200 Capsella rubella
Carub.0006s2141 5.0kb upstream 5.0kb upstream 7031 true scaffold_6: 8021201-8028231 Capsella rubella
Carub.0006s2141 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 8023232-8028231 Capsella rubella
Carub.0006s2141 5.0kb downstream 5.0kb downstream 7031 true scaffold_6: 8016201-8023231 Capsella rubella
Carub.0006s2141 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 8016201-8021200 Capsella rubella
Carub.0006s2141 10.0kb upstream 10.0kb upstream 12031 true scaffold_6: 8021201-8033231 Capsella rubella
Carub.0006s2141 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 8023232-8033231 Capsella rubella
Carub.0006s2141 10.0kb downstream 10.0kb downstream 12031 true scaffold_6: 8011201-8023231 Capsella rubella
Carub.0006s2141 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 8011201-8021200 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368118 5261 Brassicaceae View MSA
123839658 5264 Brassicales-Malvales View MSA
124342506 5266 SBM View MSA
124253102 5268 Malvidae View MSA
124071404 5270 Rosid View MSA
123751761 5271 Pentapetalae View MSA
122795579 5272 Eudicot View MSA
122043029 5273 Angiosperm View MSA
121310066 5274 Embryophyte View MSA
123428840 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain