Gene : Carub.0006s2154 C. rubella v1.1
Defline:  (1 of 3) PTHR22950//PTHR22950:SF228 - AMINO ACID TRANSPORTER // AMINO ACID PERMEASE 7-RELATED Genomic Order:  2154
Name:  ? Carub.0006s2154 Secondary Identifier:  ? PAC:39246234
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s2154 0.5kb upstream 0.5kb upstream 2954 true scaffold_6: 8068645-8071598 Capsella rubella
Carub.0006s2154 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 8068645-8069144 Capsella rubella
Carub.0006s2154 0.5kb downstream 0.5kb downstream 2954 true scaffold_6: 8069145-8072098 Capsella rubella
Carub.0006s2154 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 8071599-8072098 Capsella rubella
Carub.0006s2154 1.0kb upstream 1.0kb upstream 3454 true scaffold_6: 8068145-8071598 Capsella rubella
Carub.0006s2154 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 8068145-8069144 Capsella rubella
Carub.0006s2154 1.0kb downstream 1.0kb downstream 3454 true scaffold_6: 8069145-8072598 Capsella rubella
Carub.0006s2154 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 8071599-8072598 Capsella rubella
Carub.0006s2154 2.0kb upstream 2.0kb upstream 4454 true scaffold_6: 8067145-8071598 Capsella rubella
Carub.0006s2154 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 8067145-8069144 Capsella rubella
Carub.0006s2154 2.0kb downstream 2.0kb downstream 4454 true scaffold_6: 8069145-8073598 Capsella rubella
Carub.0006s2154 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 8071599-8073598 Capsella rubella
Carub.0006s2154 5.0kb upstream 5.0kb upstream 7454 true scaffold_6: 8064145-8071598 Capsella rubella
Carub.0006s2154 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 8064145-8069144 Capsella rubella
Carub.0006s2154 5.0kb downstream 5.0kb downstream 7454 true scaffold_6: 8069145-8076598 Capsella rubella
Carub.0006s2154 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 8071599-8076598 Capsella rubella
Carub.0006s2154 10.0kb upstream 10.0kb upstream 12454 true scaffold_6: 8059145-8071598 Capsella rubella
Carub.0006s2154 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 8059145-8069144 Capsella rubella
Carub.0006s2154 10.0kb downstream 10.0kb downstream 12454 true scaffold_6: 8069145-8081598 Capsella rubella
Carub.0006s2154 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 8071599-8081598 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374233 5261 Brassicaceae View MSA
123832038 5264 Brassicales-Malvales View MSA
124350532 5266 SBM View MSA
124245004 5268 Malvidae View MSA
124073088 5270 Rosid View MSA
123750182 5271 Pentapetalae View MSA
122795747 5272 Eudicot View MSA
122050669 5273 Angiosperm View MSA
121352458 5274 Embryophyte View MSA
123382790 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain