Protein : Carub.0006s2185.1.p C. rubella v1.1

Secondary Identifier:  PAC:39246599 Organism Name:  Capsella rubella
Length:  519   Name:  Carub.0006s2185.1.p
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Proteins

8 Protein Domains

DB identifier Type Name
IPR011991 Domain Winged helix-turn-helix DNA-binding domain
IPR014284 Domain RNA polymerase sigma-70 like domain
IPR013324 Domain RNA polymerase sigma factor, region 3/4
IPR013325 Domain RNA polymerase sigma factor, region 2
IPR007627 Domain RNA polymerase sigma-70 region 2
IPR007630 Domain RNA polymerase sigma-70 region 4
IPR000943 Domain RNA polymerase sigma-70
IPR007624 Domain RNA polymerase sigma-70 region 3
 

Other

1 CDSs

DB identifier Length Chromosome Location
Organism . Name
Carub.0006s2185.1_CDS 1560   scaffold_6: 8180033-8182026 Capsella rubella

25 Ontology Annotations

Ontology Term Db Gene/Protein Name
TIGR02937 TIGRFAMs Carub.0006s2185.1.p
SSF88946 SSF Carub.0006s2185.1.p
SSF88659 SSF Carub.0006s2185.1.p
G3DSA:1.10.601.10 GENE3D Carub.0006s2185.1.p
G3DSA:1.10.10.10 GENE3D Carub.0006s2185.1.p
GO:0006355 GO Carub.0006s2185.1.p
GO:0006352 GO Carub.0006s2185.1.p
GO:0003700 GO Carub.0006s2185.1.p
GO:0003677 GO Carub.0006s2185.1.p
PTHR30603:SF4 PANTHER Carub.0006s2185.1.p
PTHR30603 PANTHER Carub.0006s2185.1.p
K03093 KEGG Carub.0006s2185.1.p
IPR014284 InterPro Carub.0006s2185.1.p
PR00046 PRINTS Carub.0006s2185.1.p
PF04545 PFAM Carub.0006s2185.1.p
PF04542 PFAM Carub.0006s2185.1.p
PF04539 PFAM Carub.0006s2185.1.p
IPR007627 InterPro Carub.0006s2185.1.p
IPR007624 InterPro Carub.0006s2185.1.p
IPR000943 InterPro Carub.0006s2185.1.p
GO:0016987 GO Carub.0006s2185.1.p
IPR013325 InterPro Carub.0006s2185.1.p
IPR013324 InterPro Carub.0006s2185.1.p
IPR011991 InterPro Carub.0006s2185.1.p
IPR007630 InterPro Carub.0006s2185.1.p

0 Pathway Components

0 Pathways