Gene : Carub.0006s2220 C. rubella v1.1
Defline:  (1 of 3) PTHR13954:SF13 - SERINE/THREONINE-PROTEIN KINASE/ENDORIBONUCLEASE IRE1B Genomic Order:  2220
Name:  ? Carub.0006s2220 Secondary Identifier:  ? PAC:39246846
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s2220 0.5kb upstream 0.5kb upstream 4024 true scaffold_6: 8353808-8357831 Capsella rubella
Carub.0006s2220 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 8353808-8354307 Capsella rubella
Carub.0006s2220 0.5kb downstream 0.5kb downstream 4024 true scaffold_6: 8354308-8358331 Capsella rubella
Carub.0006s2220 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 8357832-8358331 Capsella rubella
Carub.0006s2220 1.0kb upstream 1.0kb upstream 4524 true scaffold_6: 8353308-8357831 Capsella rubella
Carub.0006s2220 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 8353308-8354307 Capsella rubella
Carub.0006s2220 1.0kb downstream 1.0kb downstream 4524 true scaffold_6: 8354308-8358831 Capsella rubella
Carub.0006s2220 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 8357832-8358831 Capsella rubella
Carub.0006s2220 2.0kb upstream 2.0kb upstream 5524 true scaffold_6: 8352308-8357831 Capsella rubella
Carub.0006s2220 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 8352308-8354307 Capsella rubella
Carub.0006s2220 2.0kb downstream 2.0kb downstream 5524 true scaffold_6: 8354308-8359831 Capsella rubella
Carub.0006s2220 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 8357832-8359831 Capsella rubella
Carub.0006s2220 5.0kb upstream 5.0kb upstream 8524 true scaffold_6: 8349308-8357831 Capsella rubella
Carub.0006s2220 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 8349308-8354307 Capsella rubella
Carub.0006s2220 5.0kb downstream 5.0kb downstream 8524 true scaffold_6: 8354308-8362831 Capsella rubella
Carub.0006s2220 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 8357832-8362831 Capsella rubella
Carub.0006s2220 10.0kb upstream 10.0kb upstream 13524 true scaffold_6: 8344308-8357831 Capsella rubella
Carub.0006s2220 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 8344308-8354307 Capsella rubella
Carub.0006s2220 10.0kb downstream 10.0kb downstream 13524 true scaffold_6: 8354308-8367831 Capsella rubella
Carub.0006s2220 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 8357832-8367831 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372802 5261 Brassicaceae View MSA
123827975 5264 Brassicales-Malvales View MSA
124345434 5266 SBM View MSA
124250283 5268 Malvidae View MSA
124069221 5270 Rosid View MSA
123736649 5271 Pentapetalae View MSA
122796979 5272 Eudicot View MSA
122047028 5273 Angiosperm View MSA
123429186 5275 Viridiplantae View MSA
121347978 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain