Gene : Carub.0006s2350 C. rubella v1.1
Defline:  (1 of 1) PF12854//PF13041//PF13812 - PPR repeat (PPR_1) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  2350
Name:  ? Carub.0006s2350 Secondary Identifier:  ? PAC:39247799
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s2350 0.5kb upstream 0.5kb upstream 3154 true scaffold_6: 8944862-8948015 Capsella rubella
Carub.0006s2350 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 8944862-8945361 Capsella rubella
Carub.0006s2350 0.5kb downstream 0.5kb downstream 3154 true scaffold_6: 8945362-8948515 Capsella rubella
Carub.0006s2350 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 8948016-8948515 Capsella rubella
Carub.0006s2350 1.0kb upstream 1.0kb upstream 3654 true scaffold_6: 8944362-8948015 Capsella rubella
Carub.0006s2350 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 8944362-8945361 Capsella rubella
Carub.0006s2350 1.0kb downstream 1.0kb downstream 3654 true scaffold_6: 8945362-8949015 Capsella rubella
Carub.0006s2350 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 8948016-8949015 Capsella rubella
Carub.0006s2350 2.0kb upstream 2.0kb upstream 4654 true scaffold_6: 8943362-8948015 Capsella rubella
Carub.0006s2350 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 8943362-8945361 Capsella rubella
Carub.0006s2350 2.0kb downstream 2.0kb downstream 4654 true scaffold_6: 8945362-8950015 Capsella rubella
Carub.0006s2350 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 8948016-8950015 Capsella rubella
Carub.0006s2350 5.0kb upstream 5.0kb upstream 7654 true scaffold_6: 8940362-8948015 Capsella rubella
Carub.0006s2350 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 8940362-8945361 Capsella rubella
Carub.0006s2350 5.0kb downstream 5.0kb downstream 7654 true scaffold_6: 8945362-8953015 Capsella rubella
Carub.0006s2350 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 8948016-8953015 Capsella rubella
Carub.0006s2350 10.0kb upstream 10.0kb upstream 12654 true scaffold_6: 8935362-8948015 Capsella rubella
Carub.0006s2350 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 8935362-8945361 Capsella rubella
Carub.0006s2350 10.0kb downstream 10.0kb downstream 12654 true scaffold_6: 8945362-8958015 Capsella rubella
Carub.0006s2350 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 8948016-8958015 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374212 5261 Brassicaceae View MSA
123831013 5264 Brassicales-Malvales View MSA
124339504 5266 SBM View MSA
124249838 5268 Malvidae View MSA
124068377 5270 Rosid View MSA
123740904 5271 Pentapetalae View MSA
122792005 5272 Eudicot View MSA
122042457 5273 Angiosperm View MSA
121344277 5274 Embryophyte View MSA
123380015 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain