Gene : Carub.0006s1945 C. rubella v1.1
Defline:  (1 of 1) PTHR20973 - NON-SMC ELEMENT 1-RELATED Genomic Order:  1945
Name:  ? Carub.0006s1945 Secondary Identifier:  ? PAC:39246446
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1945 0.5kb upstream 0.5kb upstream 2734 true scaffold_6: 7211884-7214617 Capsella rubella
Carub.0006s1945 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 7214118-7214617 Capsella rubella
Carub.0006s1945 0.5kb downstream 0.5kb downstream 2734 true scaffold_6: 7211384-7214117 Capsella rubella
Carub.0006s1945 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 7211384-7211883 Capsella rubella
Carub.0006s1945 1.0kb upstream 1.0kb upstream 3234 true scaffold_6: 7211884-7215117 Capsella rubella
Carub.0006s1945 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 7214118-7215117 Capsella rubella
Carub.0006s1945 1.0kb downstream 1.0kb downstream 3234 true scaffold_6: 7210884-7214117 Capsella rubella
Carub.0006s1945 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 7210884-7211883 Capsella rubella
Carub.0006s1945 2.0kb upstream 2.0kb upstream 4234 true scaffold_6: 7211884-7216117 Capsella rubella
Carub.0006s1945 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 7214118-7216117 Capsella rubella
Carub.0006s1945 2.0kb downstream 2.0kb downstream 4234 true scaffold_6: 7209884-7214117 Capsella rubella
Carub.0006s1945 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 7209884-7211883 Capsella rubella
Carub.0006s1945 5.0kb upstream 5.0kb upstream 7234 true scaffold_6: 7211884-7219117 Capsella rubella
Carub.0006s1945 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 7214118-7219117 Capsella rubella
Carub.0006s1945 5.0kb downstream 5.0kb downstream 7234 true scaffold_6: 7206884-7214117 Capsella rubella
Carub.0006s1945 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 7206884-7211883 Capsella rubella
Carub.0006s1945 10.0kb upstream 10.0kb upstream 12234 true scaffold_6: 7211884-7224117 Capsella rubella
Carub.0006s1945 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 7214118-7224117 Capsella rubella
Carub.0006s1945 10.0kb downstream 10.0kb downstream 12234 true scaffold_6: 7201884-7214117 Capsella rubella
Carub.0006s1945 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 7201884-7211883 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375698 5261 Brassicaceae View MSA
123828463 5264 Brassicales-Malvales View MSA
124344649 5266 SBM View MSA
124236948 5268 Malvidae View MSA
124060843 5270 Rosid View MSA
123738022 5271 Pentapetalae View MSA
122793177 5272 Eudicot View MSA
122042015 5273 Angiosperm View MSA
121350451 5274 Embryophyte View MSA
123426397 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain