Gene : Carub.0006s1958 C. rubella v1.1
Genomic Order:  1958 Name:  ? Carub.0006s1958
Secondary Identifier:  ? PAC:39247447
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1958 0.5kb upstream 0.5kb upstream 1629 true scaffold_6: 7275387-7277015 Capsella rubella
Carub.0006s1958 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 7276516-7277015 Capsella rubella
Carub.0006s1958 0.5kb downstream 0.5kb downstream 1629 true scaffold_6: 7274887-7276515 Capsella rubella
Carub.0006s1958 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 7274887-7275386 Capsella rubella
Carub.0006s1958 1.0kb upstream 1.0kb upstream 2129 true scaffold_6: 7275387-7277515 Capsella rubella
Carub.0006s1958 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 7276516-7277515 Capsella rubella
Carub.0006s1958 1.0kb downstream 1.0kb downstream 2129 true scaffold_6: 7274387-7276515 Capsella rubella
Carub.0006s1958 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 7274387-7275386 Capsella rubella
Carub.0006s1958 2.0kb upstream 2.0kb upstream 3129 true scaffold_6: 7275387-7278515 Capsella rubella
Carub.0006s1958 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 7276516-7278515 Capsella rubella
Carub.0006s1958 2.0kb downstream 2.0kb downstream 3129 true scaffold_6: 7273387-7276515 Capsella rubella
Carub.0006s1958 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 7273387-7275386 Capsella rubella
Carub.0006s1958 5.0kb upstream 5.0kb upstream 6129 true scaffold_6: 7275387-7281515 Capsella rubella
Carub.0006s1958 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 7276516-7281515 Capsella rubella
Carub.0006s1958 5.0kb downstream 5.0kb downstream 6129 true scaffold_6: 7270387-7276515 Capsella rubella
Carub.0006s1958 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 7270387-7275386 Capsella rubella
Carub.0006s1958 10.0kb upstream 10.0kb upstream 11129 true scaffold_6: 7275387-7286515 Capsella rubella
Carub.0006s1958 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 7276516-7286515 Capsella rubella
Carub.0006s1958 10.0kb downstream 10.0kb downstream 11129 true scaffold_6: 7265387-7276515 Capsella rubella
Carub.0006s1958 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 7265387-7275386 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373227 5261 Brassicaceae View MSA
123839419 5264 Brassicales-Malvales View MSA
124349249 5266 SBM View MSA
124250850 5268 Malvidae View MSA
124073075 5270 Rosid View MSA
123744259 5271 Pentapetalae View MSA
122795127 5272 Eudicot View MSA
122049442 5273 Angiosperm View MSA
121350445 5274 Embryophyte View MSA
123381735 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain