Gene : Carub.0006s1936 C. rubella v1.1
Defline:  (1 of 1) PTHR21499//PTHR21499:SF33 - ASPARTATE KINASE // HOMOSERINE DEHYDROGENASE Genomic Order:  1936
Name:  ? Carub.0006s1936 Secondary Identifier:  ? PAC:39249006
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella HOMOSERSYN-PWY Capsella rubella pathologic  
Crubella PWY-3001 Capsella rubella pathologic  
Crubella PWY-724 Capsella rubella pathologic  
Crubella THRESYN-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1936 0.5kb upstream 0.5kb upstream 4348 true scaffold_6: 7172518-7176865 Capsella rubella
Carub.0006s1936 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 7176366-7176865 Capsella rubella
Carub.0006s1936 0.5kb downstream 0.5kb downstream 4348 true scaffold_6: 7172018-7176365 Capsella rubella
Carub.0006s1936 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 7172018-7172517 Capsella rubella
Carub.0006s1936 1.0kb upstream 1.0kb upstream 4848 true scaffold_6: 7172518-7177365 Capsella rubella
Carub.0006s1936 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 7176366-7177365 Capsella rubella
Carub.0006s1936 1.0kb downstream 1.0kb downstream 4848 true scaffold_6: 7171518-7176365 Capsella rubella
Carub.0006s1936 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 7171518-7172517 Capsella rubella
Carub.0006s1936 2.0kb upstream 2.0kb upstream 5848 true scaffold_6: 7172518-7178365 Capsella rubella
Carub.0006s1936 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 7176366-7178365 Capsella rubella
Carub.0006s1936 2.0kb downstream 2.0kb downstream 5848 true scaffold_6: 7170518-7176365 Capsella rubella
Carub.0006s1936 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 7170518-7172517 Capsella rubella
Carub.0006s1936 5.0kb upstream 5.0kb upstream 8848 true scaffold_6: 7172518-7181365 Capsella rubella
Carub.0006s1936 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 7176366-7181365 Capsella rubella
Carub.0006s1936 5.0kb downstream 5.0kb downstream 8848 true scaffold_6: 7167518-7176365 Capsella rubella
Carub.0006s1936 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 7167518-7172517 Capsella rubella
Carub.0006s1936 10.0kb upstream 10.0kb upstream 13848 true scaffold_6: 7172518-7186365 Capsella rubella
Carub.0006s1936 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 7176366-7186365 Capsella rubella
Carub.0006s1936 10.0kb downstream 10.0kb downstream 13848 true scaffold_6: 7162518-7176365 Capsella rubella
Carub.0006s1936 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 7162518-7172517 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373451 5261 Brassicaceae View MSA
123833269 5264 Brassicales-Malvales View MSA
124336802 5266 SBM View MSA
124242430 5268 Malvidae View MSA
124062775 5270 Rosid View MSA
123740432 5271 Pentapetalae View MSA
122769980 5272 Eudicot View MSA
122043747 5273 Angiosperm View MSA
121349256 5274 Embryophyte View MSA
123424216 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain