Gene : Carub.0006s1941 C. rubella v1.1
Defline:  (1 of 3) 1.10.3.2//1.10.3.3 - Laccase / Urishiol oxidase // L-ascorbate oxidase / Ascorbase Genomic Order:  1941
Name:  ? Carub.0006s1941 Secondary Identifier:  ? PAC:39248148
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5466 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s1941 0.5kb upstream 0.5kb upstream 2715 true scaffold_6: 7194015-7196729 Capsella rubella
Carub.0006s1941 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 7194015-7194514 Capsella rubella
Carub.0006s1941 0.5kb downstream 0.5kb downstream 2715 true scaffold_6: 7194515-7197229 Capsella rubella
Carub.0006s1941 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 7196730-7197229 Capsella rubella
Carub.0006s1941 1.0kb upstream 1.0kb upstream 3215 true scaffold_6: 7193515-7196729 Capsella rubella
Carub.0006s1941 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 7193515-7194514 Capsella rubella
Carub.0006s1941 1.0kb downstream 1.0kb downstream 3215 true scaffold_6: 7194515-7197729 Capsella rubella
Carub.0006s1941 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 7196730-7197729 Capsella rubella
Carub.0006s1941 2.0kb upstream 2.0kb upstream 4215 true scaffold_6: 7192515-7196729 Capsella rubella
Carub.0006s1941 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 7192515-7194514 Capsella rubella
Carub.0006s1941 2.0kb downstream 2.0kb downstream 4215 true scaffold_6: 7194515-7198729 Capsella rubella
Carub.0006s1941 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 7196730-7198729 Capsella rubella
Carub.0006s1941 5.0kb upstream 5.0kb upstream 7215 true scaffold_6: 7189515-7196729 Capsella rubella
Carub.0006s1941 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 7189515-7194514 Capsella rubella
Carub.0006s1941 5.0kb downstream 5.0kb downstream 7215 true scaffold_6: 7194515-7201729 Capsella rubella
Carub.0006s1941 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 7196730-7201729 Capsella rubella
Carub.0006s1941 10.0kb upstream 10.0kb upstream 12215 true scaffold_6: 7184515-7196729 Capsella rubella
Carub.0006s1941 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 7184515-7194514 Capsella rubella
Carub.0006s1941 10.0kb downstream 10.0kb downstream 12215 true scaffold_6: 7194515-7206729 Capsella rubella
Carub.0006s1941 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 7196730-7206729 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378805 5261 Brassicaceae View MSA
123833717 5264 Brassicales-Malvales View MSA
124345960 5266 SBM View MSA
124242073 5268 Malvidae View MSA
124063404 5270 Rosid View MSA
123739714 5271 Pentapetalae View MSA
122791263 5272 Eudicot View MSA
122042920 5273 Angiosperm View MSA
121348734 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain