Gene : Carub.0006s2100 C. rubella v1.1
Defline:  (1 of 1) PTHR11080//PTHR11080:SF13 - PYRAZINAMIDASE/NICOTINAMIDASE // NICOTINAMIDASE 3 Genomic Order:  2100
Name:  ? Carub.0006s2100 Secondary Identifier:  ? PAC:39246406
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-5381 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s2100 0.5kb upstream 0.5kb upstream 1109 true scaffold_6: 7867300-7868408 Capsella rubella
Carub.0006s2100 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 7867909-7868408 Capsella rubella
Carub.0006s2100 0.5kb downstream 0.5kb downstream 1109 true scaffold_6: 7866800-7867908 Capsella rubella
Carub.0006s2100 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 7866800-7867299 Capsella rubella
Carub.0006s2100 1.0kb upstream 1.0kb upstream 1609 true scaffold_6: 7867300-7868908 Capsella rubella
Carub.0006s2100 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 7867909-7868908 Capsella rubella
Carub.0006s2100 1.0kb downstream 1.0kb downstream 1609 true scaffold_6: 7866300-7867908 Capsella rubella
Carub.0006s2100 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 7866300-7867299 Capsella rubella
Carub.0006s2100 2.0kb upstream 2.0kb upstream 2609 true scaffold_6: 7867300-7869908 Capsella rubella
Carub.0006s2100 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 7867909-7869908 Capsella rubella
Carub.0006s2100 2.0kb downstream 2.0kb downstream 2609 true scaffold_6: 7865300-7867908 Capsella rubella
Carub.0006s2100 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 7865300-7867299 Capsella rubella
Carub.0006s2100 5.0kb upstream 5.0kb upstream 5609 true scaffold_6: 7867300-7872908 Capsella rubella
Carub.0006s2100 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 7867909-7872908 Capsella rubella
Carub.0006s2100 5.0kb downstream 5.0kb downstream 5609 true scaffold_6: 7862300-7867908 Capsella rubella
Carub.0006s2100 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 7862300-7867299 Capsella rubella
Carub.0006s2100 10.0kb upstream 10.0kb upstream 10609 true scaffold_6: 7867300-7877908 Capsella rubella
Carub.0006s2100 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 7867909-7877908 Capsella rubella
Carub.0006s2100 10.0kb downstream 10.0kb downstream 10609 true scaffold_6: 7857300-7867908 Capsella rubella
Carub.0006s2100 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 7857300-7867299 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363236 5261 Brassicaceae View MSA
123837745 5264 Brassicales-Malvales View MSA
124344885 5266 SBM View MSA
124240068 5268 Malvidae View MSA
124061272 5270 Rosid View MSA
123742899 5271 Pentapetalae View MSA
122791085 5272 Eudicot View MSA
122047697 5273 Angiosperm View MSA
121347949 5274 Embryophyte View MSA
123427171 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain