Gene : Carub.0006s2103 C. rubella v1.1
Defline:  (1 of 1) PTHR11945:SF242 - PROTEIN TRANSPARENT TESTA 16 Genomic Order:  2103
Name:  ? Carub.0006s2103 Secondary Identifier:  ? PAC:39249971
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0006s2103 0.5kb upstream 0.5kb upstream 3013 true scaffold_6: 7874516-7877528 Capsella rubella
Carub.0006s2103 0.5kb upstream 0.5kb upstream 500 false scaffold_6: 7874516-7875015 Capsella rubella
Carub.0006s2103 0.5kb downstream 0.5kb downstream 3013 true scaffold_6: 7875016-7878028 Capsella rubella
Carub.0006s2103 0.5kb downstream 0.5kb downstream 500 false scaffold_6: 7877529-7878028 Capsella rubella
Carub.0006s2103 1.0kb upstream 1.0kb upstream 3513 true scaffold_6: 7874016-7877528 Capsella rubella
Carub.0006s2103 1.0kb upstream 1.0kb upstream 1000 false scaffold_6: 7874016-7875015 Capsella rubella
Carub.0006s2103 1.0kb downstream 1.0kb downstream 3513 true scaffold_6: 7875016-7878528 Capsella rubella
Carub.0006s2103 1.0kb downstream 1.0kb downstream 1000 false scaffold_6: 7877529-7878528 Capsella rubella
Carub.0006s2103 2.0kb upstream 2.0kb upstream 4513 true scaffold_6: 7873016-7877528 Capsella rubella
Carub.0006s2103 2.0kb upstream 2.0kb upstream 2000 false scaffold_6: 7873016-7875015 Capsella rubella
Carub.0006s2103 2.0kb downstream 2.0kb downstream 4513 true scaffold_6: 7875016-7879528 Capsella rubella
Carub.0006s2103 2.0kb downstream 2.0kb downstream 2000 false scaffold_6: 7877529-7879528 Capsella rubella
Carub.0006s2103 5.0kb upstream 5.0kb upstream 7513 true scaffold_6: 7870016-7877528 Capsella rubella
Carub.0006s2103 5.0kb upstream 5.0kb upstream 5000 false scaffold_6: 7870016-7875015 Capsella rubella
Carub.0006s2103 5.0kb downstream 5.0kb downstream 7513 true scaffold_6: 7875016-7882528 Capsella rubella
Carub.0006s2103 5.0kb downstream 5.0kb downstream 5000 false scaffold_6: 7877529-7882528 Capsella rubella
Carub.0006s2103 10.0kb upstream 10.0kb upstream 12513 true scaffold_6: 7865016-7877528 Capsella rubella
Carub.0006s2103 10.0kb upstream 10.0kb upstream 10000 false scaffold_6: 7865016-7875015 Capsella rubella
Carub.0006s2103 10.0kb downstream 10.0kb downstream 12513 true scaffold_6: 7875016-7887528 Capsella rubella
Carub.0006s2103 10.0kb downstream 10.0kb downstream 10000 false scaffold_6: 7877529-7887528 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377405 5261 Brassicaceae View MSA
123834072 5264 Brassicales-Malvales View MSA
124340883 5266 SBM View MSA
124239237 5268 Malvidae View MSA
124062898 5270 Rosid View MSA
123748976 5271 Pentapetalae View MSA
122793472 5272 Eudicot View MSA
122046677 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain