Gene : Carub.0003s2775 C. rubella v1.1
Defline:  (1 of 2) PTHR31414//PTHR31414:SF1 - FAMILY NOT NAMED // TRANSMEMBRANE PROTEIN DDB_G0292058 Genomic Order:  2775
Name:  ? Carub.0003s2775 Secondary Identifier:  ? PAC:39241224
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2775 0.5kb upstream 0.5kb upstream 3669 true scaffold_3: 11157512-11161180 Capsella rubella
Carub.0003s2775 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 11160681-11161180 Capsella rubella
Carub.0003s2775 0.5kb downstream 0.5kb downstream 3669 true scaffold_3: 11157012-11160680 Capsella rubella
Carub.0003s2775 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 11157012-11157511 Capsella rubella
Carub.0003s2775 1.0kb upstream 1.0kb upstream 4169 true scaffold_3: 11157512-11161680 Capsella rubella
Carub.0003s2775 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 11160681-11161680 Capsella rubella
Carub.0003s2775 1.0kb downstream 1.0kb downstream 4169 true scaffold_3: 11156512-11160680 Capsella rubella
Carub.0003s2775 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 11156512-11157511 Capsella rubella
Carub.0003s2775 2.0kb upstream 2.0kb upstream 5169 true scaffold_3: 11157512-11162680 Capsella rubella
Carub.0003s2775 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 11160681-11162680 Capsella rubella
Carub.0003s2775 2.0kb downstream 2.0kb downstream 5169 true scaffold_3: 11155512-11160680 Capsella rubella
Carub.0003s2775 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 11155512-11157511 Capsella rubella
Carub.0003s2775 5.0kb upstream 5.0kb upstream 8169 true scaffold_3: 11157512-11165680 Capsella rubella
Carub.0003s2775 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 11160681-11165680 Capsella rubella
Carub.0003s2775 5.0kb downstream 5.0kb downstream 8169 true scaffold_3: 11152512-11160680 Capsella rubella
Carub.0003s2775 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 11152512-11157511 Capsella rubella
Carub.0003s2775 10.0kb upstream 10.0kb upstream 13169 true scaffold_3: 11157512-11170680 Capsella rubella
Carub.0003s2775 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 11160681-11170680 Capsella rubella
Carub.0003s2775 10.0kb downstream 10.0kb downstream 13169 true scaffold_3: 11147512-11160680 Capsella rubella
Carub.0003s2775 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 11147512-11157511 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378583 5261 Brassicaceae View MSA
123839550 5264 Brassicales-Malvales View MSA
124344666 5266 SBM View MSA
124246122 5268 Malvidae View MSA
124069186 5270 Rosid View MSA
123747530 5271 Pentapetalae View MSA
122793265 5272 Eudicot View MSA
122043467 5273 Angiosperm View MSA
123429125 5275 Viridiplantae View MSA
121350323 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain