Gene : Carub.0003s2299 C. rubella v1.1
Defline:  (1 of 2) PTHR11772:SF8 - ALUMINIUM INDUCED PROTEIN WITH YGL AND LRDR MOTIFS-RELATED Genomic Order:  2299
Name:  ? Carub.0003s2299 Secondary Identifier:  ? PAC:39242022
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2299 0.5kb upstream 0.5kb upstream 1992 true scaffold_3: 8315336-8317327 Capsella rubella
Carub.0003s2299 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 8315336-8315835 Capsella rubella
Carub.0003s2299 0.5kb downstream 0.5kb downstream 1992 true scaffold_3: 8315836-8317827 Capsella rubella
Carub.0003s2299 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 8317328-8317827 Capsella rubella
Carub.0003s2299 1.0kb upstream 1.0kb upstream 2492 true scaffold_3: 8314836-8317327 Capsella rubella
Carub.0003s2299 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 8314836-8315835 Capsella rubella
Carub.0003s2299 1.0kb downstream 1.0kb downstream 2492 true scaffold_3: 8315836-8318327 Capsella rubella
Carub.0003s2299 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 8317328-8318327 Capsella rubella
Carub.0003s2299 2.0kb upstream 2.0kb upstream 3492 true scaffold_3: 8313836-8317327 Capsella rubella
Carub.0003s2299 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 8313836-8315835 Capsella rubella
Carub.0003s2299 2.0kb downstream 2.0kb downstream 3492 true scaffold_3: 8315836-8319327 Capsella rubella
Carub.0003s2299 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 8317328-8319327 Capsella rubella
Carub.0003s2299 5.0kb upstream 5.0kb upstream 6492 true scaffold_3: 8310836-8317327 Capsella rubella
Carub.0003s2299 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 8310836-8315835 Capsella rubella
Carub.0003s2299 5.0kb downstream 5.0kb downstream 6492 true scaffold_3: 8315836-8322327 Capsella rubella
Carub.0003s2299 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 8317328-8322327 Capsella rubella
Carub.0003s2299 10.0kb upstream 10.0kb upstream 11492 true scaffold_3: 8305836-8317327 Capsella rubella
Carub.0003s2299 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 8305836-8315835 Capsella rubella
Carub.0003s2299 10.0kb downstream 10.0kb downstream 11492 true scaffold_3: 8315836-8327327 Capsella rubella
Carub.0003s2299 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 8317328-8327327 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362100 5261 Brassicaceae View MSA
123835140 5264 Brassicales-Malvales View MSA
124337817 5266 SBM View MSA
124238518 5268 Malvidae View MSA
124062275 5270 Rosid View MSA
123741924 5271 Pentapetalae View MSA
122789894 5272 Eudicot View MSA
122046778 5273 Angiosperm View MSA
121351327 5274 Embryophyte View MSA
123428842 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain