Gene : Carub.0003s2542 C. rubella v1.1
Defline:  (1 of 1) K13456 - RPM1-interacting protein 4 (RIN4) Genomic Order:  2542
Name:  ? Carub.0003s2542 Secondary Identifier:  ? PAC:39242082
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2542 0.5kb upstream 0.5kb upstream 2731 true scaffold_3: 9478698-9481428 Capsella rubella
Carub.0003s2542 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 9478698-9479197 Capsella rubella
Carub.0003s2542 0.5kb downstream 0.5kb downstream 2731 true scaffold_3: 9479198-9481928 Capsella rubella
Carub.0003s2542 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 9481429-9481928 Capsella rubella
Carub.0003s2542 1.0kb upstream 1.0kb upstream 3231 true scaffold_3: 9478198-9481428 Capsella rubella
Carub.0003s2542 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 9478198-9479197 Capsella rubella
Carub.0003s2542 1.0kb downstream 1.0kb downstream 3231 true scaffold_3: 9479198-9482428 Capsella rubella
Carub.0003s2542 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 9481429-9482428 Capsella rubella
Carub.0003s2542 2.0kb upstream 2.0kb upstream 4231 true scaffold_3: 9477198-9481428 Capsella rubella
Carub.0003s2542 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 9477198-9479197 Capsella rubella
Carub.0003s2542 2.0kb downstream 2.0kb downstream 4231 true scaffold_3: 9479198-9483428 Capsella rubella
Carub.0003s2542 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 9481429-9483428 Capsella rubella
Carub.0003s2542 5.0kb upstream 5.0kb upstream 7231 true scaffold_3: 9474198-9481428 Capsella rubella
Carub.0003s2542 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 9474198-9479197 Capsella rubella
Carub.0003s2542 5.0kb downstream 5.0kb downstream 7231 true scaffold_3: 9479198-9486428 Capsella rubella
Carub.0003s2542 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 9481429-9486428 Capsella rubella
Carub.0003s2542 10.0kb upstream 10.0kb upstream 12231 true scaffold_3: 9469198-9481428 Capsella rubella
Carub.0003s2542 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 9469198-9479197 Capsella rubella
Carub.0003s2542 10.0kb downstream 10.0kb downstream 12231 true scaffold_3: 9479198-9491428 Capsella rubella
Carub.0003s2542 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 9481429-9491428 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373073 5261 Brassicaceae View MSA
123840811 5264 Brassicales-Malvales View MSA
124344601 5266 SBM View MSA
124250408 5268 Malvidae View MSA
124074816 5270 Rosid View MSA
123749229 5271 Pentapetalae View MSA
122795391 5272 Eudicot View MSA
122048165 5273 Angiosperm View MSA
121344169 5274 Embryophyte View MSA
123379991 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain