Gene : Carub.0003s2599 C. rubella v1.1
Defline:  (1 of 1) 3.1.26.12 - Ribonuclease E / RNase E Genomic Order:  2599
Name:  ? Carub.0003s2599 Secondary Identifier:  ? PAC:39241008
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2599 0.5kb upstream 0.5kb upstream 5847 true scaffold_3: 9716151-9721997 Capsella rubella
Carub.0003s2599 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 9716151-9716650 Capsella rubella
Carub.0003s2599 0.5kb downstream 0.5kb downstream 5847 true scaffold_3: 9716651-9722497 Capsella rubella
Carub.0003s2599 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 9721998-9722497 Capsella rubella
Carub.0003s2599 1.0kb upstream 1.0kb upstream 6347 true scaffold_3: 9715651-9721997 Capsella rubella
Carub.0003s2599 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 9715651-9716650 Capsella rubella
Carub.0003s2599 1.0kb downstream 1.0kb downstream 6347 true scaffold_3: 9716651-9722997 Capsella rubella
Carub.0003s2599 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 9721998-9722997 Capsella rubella
Carub.0003s2599 2.0kb upstream 2.0kb upstream 7347 true scaffold_3: 9714651-9721997 Capsella rubella
Carub.0003s2599 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 9714651-9716650 Capsella rubella
Carub.0003s2599 2.0kb downstream 2.0kb downstream 7347 true scaffold_3: 9716651-9723997 Capsella rubella
Carub.0003s2599 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 9721998-9723997 Capsella rubella
Carub.0003s2599 5.0kb upstream 5.0kb upstream 10347 true scaffold_3: 9711651-9721997 Capsella rubella
Carub.0003s2599 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 9711651-9716650 Capsella rubella
Carub.0003s2599 5.0kb downstream 5.0kb downstream 10347 true scaffold_3: 9716651-9726997 Capsella rubella
Carub.0003s2599 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 9721998-9726997 Capsella rubella
Carub.0003s2599 10.0kb upstream 10.0kb upstream 15347 true scaffold_3: 9706651-9721997 Capsella rubella
Carub.0003s2599 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 9706651-9716650 Capsella rubella
Carub.0003s2599 10.0kb downstream 10.0kb downstream 15347 true scaffold_3: 9716651-9731997 Capsella rubella
Carub.0003s2599 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 9721998-9731997 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369035 5261 Brassicaceae View MSA
123828821 5264 Brassicales-Malvales View MSA
124339416 5266 SBM View MSA
124237157 5268 Malvidae View MSA
124068993 5270 Rosid View MSA
123738651 5271 Pentapetalae View MSA
122790207 5272 Eudicot View MSA
122044812 5273 Angiosperm View MSA
121350131 5274 Embryophyte View MSA
123426847 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain