Gene : Carub.0003s2234 C. rubella v1.1

Defline:  (1 of 1) PTHR31669:SF26 - PROTEIN FAR-RED ELONGATED HYPOCOTYL 3 Genomic Order:  2234
Name:  ? Carub.0003s2234 Secondary Identifier:  ? PAC:39241078

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2234 0.5kb upstream 0.5kb upstream 4529 true scaffold_3: 8066260-8070788 Capsella rubella
Carub.0003s2234 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 8070289-8070788 Capsella rubella
Carub.0003s2234 0.5kb downstream 0.5kb downstream 4529 true scaffold_3: 8065760-8070288 Capsella rubella
Carub.0003s2234 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 8065760-8066259 Capsella rubella
Carub.0003s2234 1.0kb upstream 1.0kb upstream 5029 true scaffold_3: 8066260-8071288 Capsella rubella
Carub.0003s2234 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 8070289-8071288 Capsella rubella
Carub.0003s2234 1.0kb downstream 1.0kb downstream 5029 true scaffold_3: 8065260-8070288 Capsella rubella
Carub.0003s2234 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 8065260-8066259 Capsella rubella
Carub.0003s2234 2.0kb upstream 2.0kb upstream 6029 true scaffold_3: 8066260-8072288 Capsella rubella
Carub.0003s2234 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 8070289-8072288 Capsella rubella
Carub.0003s2234 2.0kb downstream 2.0kb downstream 6029 true scaffold_3: 8064260-8070288 Capsella rubella
Carub.0003s2234 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 8064260-8066259 Capsella rubella
Carub.0003s2234 5.0kb upstream 5.0kb upstream 9029 true scaffold_3: 8066260-8075288 Capsella rubella
Carub.0003s2234 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 8070289-8075288 Capsella rubella
Carub.0003s2234 5.0kb downstream 5.0kb downstream 9029 true scaffold_3: 8061260-8070288 Capsella rubella
Carub.0003s2234 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 8061260-8066259 Capsella rubella
Carub.0003s2234 10.0kb upstream 10.0kb upstream 14029 true scaffold_3: 8066260-8080288 Capsella rubella
Carub.0003s2234 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 8070289-8080288 Capsella rubella
Carub.0003s2234 10.0kb downstream 10.0kb downstream 14029 true scaffold_3: 8056260-8070288 Capsella rubella
Carub.0003s2234 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 8056260-8066259 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365937 5261 Brassicaceae View MSA
123835081 5264 Brassicales-Malvales View MSA
124322003 5266 SBM View MSA
124240275 5268 Malvidae View MSA
124064363 5270 Rosid View MSA
123752178 5271 Pentapetalae View MSA
122796628 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain