Gene : Carub.0003s2239 C. rubella v1.1
Defline:  (1 of 3) K02901 - large subunit ribosomal protein L27e (RP-L27e, RPL27) Genomic Order:  2239
Name:  ? Carub.0003s2239 Secondary Identifier:  ? PAC:39241335
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2239 0.5kb upstream 0.5kb upstream 1131 true scaffold_3: 8089626-8090756 Capsella rubella
Carub.0003s2239 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 8090257-8090756 Capsella rubella
Carub.0003s2239 0.5kb downstream 0.5kb downstream 1131 true scaffold_3: 8089126-8090256 Capsella rubella
Carub.0003s2239 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 8089126-8089625 Capsella rubella
Carub.0003s2239 1.0kb upstream 1.0kb upstream 1631 true scaffold_3: 8089626-8091256 Capsella rubella
Carub.0003s2239 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 8090257-8091256 Capsella rubella
Carub.0003s2239 1.0kb downstream 1.0kb downstream 1631 true scaffold_3: 8088626-8090256 Capsella rubella
Carub.0003s2239 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 8088626-8089625 Capsella rubella
Carub.0003s2239 2.0kb upstream 2.0kb upstream 2631 true scaffold_3: 8089626-8092256 Capsella rubella
Carub.0003s2239 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 8090257-8092256 Capsella rubella
Carub.0003s2239 2.0kb downstream 2.0kb downstream 2631 true scaffold_3: 8087626-8090256 Capsella rubella
Carub.0003s2239 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 8087626-8089625 Capsella rubella
Carub.0003s2239 5.0kb upstream 5.0kb upstream 5631 true scaffold_3: 8089626-8095256 Capsella rubella
Carub.0003s2239 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 8090257-8095256 Capsella rubella
Carub.0003s2239 5.0kb downstream 5.0kb downstream 5631 true scaffold_3: 8084626-8090256 Capsella rubella
Carub.0003s2239 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 8084626-8089625 Capsella rubella
Carub.0003s2239 10.0kb upstream 10.0kb upstream 10631 true scaffold_3: 8089626-8100256 Capsella rubella
Carub.0003s2239 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 8090257-8100256 Capsella rubella
Carub.0003s2239 10.0kb downstream 10.0kb downstream 10631 true scaffold_3: 8079626-8090256 Capsella rubella
Carub.0003s2239 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 8079626-8089625 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343830 5261 Brassicaceae View MSA
123783925 5264 Brassicales-Malvales View MSA
124282131 5266 SBM View MSA
124254119 5268 Malvidae View MSA
124065262 5270 Rosid View MSA
123741736 5271 Pentapetalae View MSA
122786015 5272 Eudicot View MSA
122045020 5273 Angiosperm View MSA
121345737 5274 Embryophyte View MSA
123427909 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain