Gene : Carub.0003s2249 C. rubella v1.1
Defline:  (1 of 5) K03013 - DNA-directed RNA polymerases I, II, and III subunit RPABC1 (RPB5, POLR2E) Genomic Order:  2249
Name:  ? Carub.0003s2249 Secondary Identifier:  ? PAC:39240161
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2249 0.5kb upstream 0.5kb upstream 2092 true scaffold_3: 8124406-8126497 Capsella rubella
Carub.0003s2249 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 8125998-8126497 Capsella rubella
Carub.0003s2249 0.5kb downstream 0.5kb downstream 2092 true scaffold_3: 8123906-8125997 Capsella rubella
Carub.0003s2249 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 8123906-8124405 Capsella rubella
Carub.0003s2249 1.0kb upstream 1.0kb upstream 2592 true scaffold_3: 8124406-8126997 Capsella rubella
Carub.0003s2249 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 8125998-8126997 Capsella rubella
Carub.0003s2249 1.0kb downstream 1.0kb downstream 2592 true scaffold_3: 8123406-8125997 Capsella rubella
Carub.0003s2249 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 8123406-8124405 Capsella rubella
Carub.0003s2249 2.0kb upstream 2.0kb upstream 3592 true scaffold_3: 8124406-8127997 Capsella rubella
Carub.0003s2249 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 8125998-8127997 Capsella rubella
Carub.0003s2249 2.0kb downstream 2.0kb downstream 3592 true scaffold_3: 8122406-8125997 Capsella rubella
Carub.0003s2249 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 8122406-8124405 Capsella rubella
Carub.0003s2249 5.0kb upstream 5.0kb upstream 6592 true scaffold_3: 8124406-8130997 Capsella rubella
Carub.0003s2249 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 8125998-8130997 Capsella rubella
Carub.0003s2249 5.0kb downstream 5.0kb downstream 6592 true scaffold_3: 8119406-8125997 Capsella rubella
Carub.0003s2249 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 8119406-8124405 Capsella rubella
Carub.0003s2249 10.0kb upstream 10.0kb upstream 11592 true scaffold_3: 8124406-8135997 Capsella rubella
Carub.0003s2249 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 8125998-8135997 Capsella rubella
Carub.0003s2249 10.0kb downstream 10.0kb downstream 11592 true scaffold_3: 8114406-8125997 Capsella rubella
Carub.0003s2249 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 8114406-8124405 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371657 5261 Brassicaceae View MSA
123833718 5264 Brassicales-Malvales View MSA
124340566 5266 SBM View MSA
124242111 5268 Malvidae View MSA
124061501 5270 Rosid View MSA
123752021 5271 Pentapetalae View MSA
122793391 5272 Eudicot View MSA
122044572 5273 Angiosperm View MSA
121347059 5274 Embryophyte View MSA
123424632 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain