Gene : Carub.0003s2285 C. rubella v1.1
Defline:  (1 of 56) PF01535//PF13041//PF14432 - PPR repeat (PPR) // PPR repeat family (PPR_2) // DYW family of nucleic acid deaminases (DYW_deaminase) Genomic Order:  2285
Name:  ? Carub.0003s2285 Secondary Identifier:  ? PAC:39241788
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2285 0.5kb upstream 0.5kb upstream 3064 true scaffold_3: 8249583-8252646 Capsella rubella
Carub.0003s2285 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 8252147-8252646 Capsella rubella
Carub.0003s2285 0.5kb downstream 0.5kb downstream 3064 true scaffold_3: 8249083-8252146 Capsella rubella
Carub.0003s2285 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 8249083-8249582 Capsella rubella
Carub.0003s2285 1.0kb upstream 1.0kb upstream 3564 true scaffold_3: 8249583-8253146 Capsella rubella
Carub.0003s2285 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 8252147-8253146 Capsella rubella
Carub.0003s2285 1.0kb downstream 1.0kb downstream 3564 true scaffold_3: 8248583-8252146 Capsella rubella
Carub.0003s2285 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 8248583-8249582 Capsella rubella
Carub.0003s2285 2.0kb upstream 2.0kb upstream 4564 true scaffold_3: 8249583-8254146 Capsella rubella
Carub.0003s2285 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 8252147-8254146 Capsella rubella
Carub.0003s2285 2.0kb downstream 2.0kb downstream 4564 true scaffold_3: 8247583-8252146 Capsella rubella
Carub.0003s2285 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 8247583-8249582 Capsella rubella
Carub.0003s2285 5.0kb upstream 5.0kb upstream 7564 true scaffold_3: 8249583-8257146 Capsella rubella
Carub.0003s2285 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 8252147-8257146 Capsella rubella
Carub.0003s2285 5.0kb downstream 5.0kb downstream 7564 true scaffold_3: 8244583-8252146 Capsella rubella
Carub.0003s2285 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 8244583-8249582 Capsella rubella
Carub.0003s2285 10.0kb upstream 10.0kb upstream 12564 true scaffold_3: 8249583-8262146 Capsella rubella
Carub.0003s2285 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 8252147-8262146 Capsella rubella
Carub.0003s2285 10.0kb downstream 10.0kb downstream 12564 true scaffold_3: 8239583-8252146 Capsella rubella
Carub.0003s2285 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 8239583-8249582 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362405 5261 Brassicaceae View MSA
123827627 5264 Brassicales-Malvales View MSA
124343875 5266 SBM View MSA
124248396 5268 Malvidae View MSA
124069931 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain