Gene : Carub.0003s2690 C. rubella v1.1
Defline:  (1 of 4) PTHR10969:SF43 - AUTOPHAGY-RELATED PROTEIN 8A-RELATED Genomic Order:  2690
Name:  ? Carub.0003s2690 Secondary Identifier:  ? PAC:39240546
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2690 0.5kb upstream 0.5kb upstream 2505 true scaffold_3: 10105277-10107781 Capsella rubella
Carub.0003s2690 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 10107282-10107781 Capsella rubella
Carub.0003s2690 0.5kb downstream 0.5kb downstream 2505 true scaffold_3: 10104777-10107281 Capsella rubella
Carub.0003s2690 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 10104777-10105276 Capsella rubella
Carub.0003s2690 1.0kb upstream 1.0kb upstream 3005 true scaffold_3: 10105277-10108281 Capsella rubella
Carub.0003s2690 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 10107282-10108281 Capsella rubella
Carub.0003s2690 1.0kb downstream 1.0kb downstream 3005 true scaffold_3: 10104277-10107281 Capsella rubella
Carub.0003s2690 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 10104277-10105276 Capsella rubella
Carub.0003s2690 2.0kb upstream 2.0kb upstream 4005 true scaffold_3: 10105277-10109281 Capsella rubella
Carub.0003s2690 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 10107282-10109281 Capsella rubella
Carub.0003s2690 2.0kb downstream 2.0kb downstream 4005 true scaffold_3: 10103277-10107281 Capsella rubella
Carub.0003s2690 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 10103277-10105276 Capsella rubella
Carub.0003s2690 5.0kb upstream 5.0kb upstream 7005 true scaffold_3: 10105277-10112281 Capsella rubella
Carub.0003s2690 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 10107282-10112281 Capsella rubella
Carub.0003s2690 5.0kb downstream 5.0kb downstream 7005 true scaffold_3: 10100277-10107281 Capsella rubella
Carub.0003s2690 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 10100277-10105276 Capsella rubella
Carub.0003s2690 10.0kb upstream 10.0kb upstream 12005 true scaffold_3: 10105277-10117281 Capsella rubella
Carub.0003s2690 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 10107282-10117281 Capsella rubella
Carub.0003s2690 10.0kb downstream 10.0kb downstream 12005 true scaffold_3: 10095277-10107281 Capsella rubella
Carub.0003s2690 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 10095277-10105276 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041244 5273 Angiosperm View MSA
122376693 5261 Brassicaceae View MSA
123839416 5264 Brassicales-Malvales View MSA
124338752 5266 SBM View MSA
124253964 5268 Malvidae View MSA
124069314 5270 Rosid View MSA
123741745 5271 Pentapetalae View MSA
122788161 5272 Eudicot View MSA
121349541 5274 Embryophyte View MSA
123427174 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain