Gene : Carub.0003s2789 C. rubella v1.1
Defline:  (1 of 1) 2.6.1.4//2.6.1.44//2.6.1.45//2.6.1.51 - Glycine transaminase / Glycine aminotransferase // Alanine--glyoxylate transaminase / Alanine--glyoxylate aminotransferase // Serine--glyoxylate transaminase / SGAT // Serine--pyruvate transaminase / Serine--pyruvate aminotransferase Genomic Order:  2789
Name:  ? Carub.0003s2789 Secondary Identifier:  ? PAC:39240000
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella GLYSYN-ALA-PWY Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2789 0.5kb upstream 0.5kb upstream 2224 true scaffold_3: 11336156-11338379 Capsella rubella
Carub.0003s2789 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 11337880-11338379 Capsella rubella
Carub.0003s2789 0.5kb downstream 0.5kb downstream 2224 true scaffold_3: 11335656-11337879 Capsella rubella
Carub.0003s2789 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 11335656-11336155 Capsella rubella
Carub.0003s2789 1.0kb upstream 1.0kb upstream 2724 true scaffold_3: 11336156-11338879 Capsella rubella
Carub.0003s2789 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 11337880-11338879 Capsella rubella
Carub.0003s2789 1.0kb downstream 1.0kb downstream 2724 true scaffold_3: 11335156-11337879 Capsella rubella
Carub.0003s2789 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 11335156-11336155 Capsella rubella
Carub.0003s2789 2.0kb upstream 2.0kb upstream 3724 true scaffold_3: 11336156-11339879 Capsella rubella
Carub.0003s2789 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 11337880-11339879 Capsella rubella
Carub.0003s2789 2.0kb downstream 2.0kb downstream 3724 true scaffold_3: 11334156-11337879 Capsella rubella
Carub.0003s2789 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 11334156-11336155 Capsella rubella
Carub.0003s2789 5.0kb upstream 5.0kb upstream 6724 true scaffold_3: 11336156-11342879 Capsella rubella
Carub.0003s2789 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 11337880-11342879 Capsella rubella
Carub.0003s2789 5.0kb downstream 5.0kb downstream 6724 true scaffold_3: 11331156-11337879 Capsella rubella
Carub.0003s2789 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 11331156-11336155 Capsella rubella
Carub.0003s2789 10.0kb upstream 10.0kb upstream 11724 true scaffold_3: 11336156-11347879 Capsella rubella
Carub.0003s2789 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 11337880-11347879 Capsella rubella
Carub.0003s2789 10.0kb downstream 10.0kb downstream 11724 true scaffold_3: 11326156-11337879 Capsella rubella
Carub.0003s2789 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 11326156-11336155 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378838 5261 Brassicaceae View MSA
123836334 5264 Brassicales-Malvales View MSA
124344247 5266 SBM View MSA
124241250 5268 Malvidae View MSA
124065045 5270 Rosid View MSA
123739482 5271 Pentapetalae View MSA
122787135 5272 Eudicot View MSA
122044965 5273 Angiosperm View MSA
121345609 5274 Embryophyte View MSA
123427199 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain