Gene : Carub.0003s2817 C. rubella v1.1
Defline:  (1 of 11) K11000 - callose synthase [EC:2.4.1.-] Glc b1-3 Glc (CALS) Genomic Order:  2817
Name:  ? Carub.0003s2817 Secondary Identifier:  ? PAC:39241759
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6773 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2817 0.5kb upstream 0.5kb upstream 12225 true scaffold_3: 11592127-11604351 Capsella rubella
Carub.0003s2817 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 11592127-11592626 Capsella rubella
Carub.0003s2817 0.5kb downstream 0.5kb downstream 12225 true scaffold_3: 11592627-11604851 Capsella rubella
Carub.0003s2817 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 11604352-11604851 Capsella rubella
Carub.0003s2817 1.0kb upstream 1.0kb upstream 12725 true scaffold_3: 11591627-11604351 Capsella rubella
Carub.0003s2817 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 11591627-11592626 Capsella rubella
Carub.0003s2817 1.0kb downstream 1.0kb downstream 12725 true scaffold_3: 11592627-11605351 Capsella rubella
Carub.0003s2817 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 11604352-11605351 Capsella rubella
Carub.0003s2817 2.0kb upstream 2.0kb upstream 13725 true scaffold_3: 11590627-11604351 Capsella rubella
Carub.0003s2817 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 11590627-11592626 Capsella rubella
Carub.0003s2817 2.0kb downstream 2.0kb downstream 13725 true scaffold_3: 11592627-11606351 Capsella rubella
Carub.0003s2817 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 11604352-11606351 Capsella rubella
Carub.0003s2817 5.0kb upstream 5.0kb upstream 16725 true scaffold_3: 11587627-11604351 Capsella rubella
Carub.0003s2817 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 11587627-11592626 Capsella rubella
Carub.0003s2817 5.0kb downstream 5.0kb downstream 16725 true scaffold_3: 11592627-11609351 Capsella rubella
Carub.0003s2817 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 11604352-11609351 Capsella rubella
Carub.0003s2817 10.0kb upstream 10.0kb upstream 21725 true scaffold_3: 11582627-11604351 Capsella rubella
Carub.0003s2817 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 11582627-11592626 Capsella rubella
Carub.0003s2817 10.0kb downstream 10.0kb downstream 21725 true scaffold_3: 11592627-11614351 Capsella rubella
Carub.0003s2817 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 11604352-11614351 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361913 5261 Brassicaceae View MSA
123828093 5264 Brassicales-Malvales View MSA
124346230 5266 SBM View MSA
124240742 5268 Malvidae View MSA
124065172 5270 Rosid View MSA
123736428 5271 Pentapetalae View MSA
122796898 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain