Gene : Carub.0003s2809 C. rubella v1.1
Defline:  (1 of 3) PTHR11206//PTHR11206:SF173 - MULTIDRUG RESISTANCE PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2809
Name:  ? Carub.0003s2809 Secondary Identifier:  ? PAC:39242562
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2809 0.5kb upstream 0.5kb upstream 1958 true scaffold_3: 11523637-11525594 Capsella rubella
Carub.0003s2809 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 11523637-11524136 Capsella rubella
Carub.0003s2809 0.5kb downstream 0.5kb downstream 1958 true scaffold_3: 11524137-11526094 Capsella rubella
Carub.0003s2809 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 11525595-11526094 Capsella rubella
Carub.0003s2809 1.0kb upstream 1.0kb upstream 2458 true scaffold_3: 11523137-11525594 Capsella rubella
Carub.0003s2809 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 11523137-11524136 Capsella rubella
Carub.0003s2809 1.0kb downstream 1.0kb downstream 2458 true scaffold_3: 11524137-11526594 Capsella rubella
Carub.0003s2809 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 11525595-11526594 Capsella rubella
Carub.0003s2809 2.0kb upstream 2.0kb upstream 3458 true scaffold_3: 11522137-11525594 Capsella rubella
Carub.0003s2809 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 11522137-11524136 Capsella rubella
Carub.0003s2809 2.0kb downstream 2.0kb downstream 3458 true scaffold_3: 11524137-11527594 Capsella rubella
Carub.0003s2809 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 11525595-11527594 Capsella rubella
Carub.0003s2809 5.0kb upstream 5.0kb upstream 6458 true scaffold_3: 11519137-11525594 Capsella rubella
Carub.0003s2809 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 11519137-11524136 Capsella rubella
Carub.0003s2809 5.0kb downstream 5.0kb downstream 6458 true scaffold_3: 11524137-11530594 Capsella rubella
Carub.0003s2809 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 11525595-11530594 Capsella rubella
Carub.0003s2809 10.0kb upstream 10.0kb upstream 11458 true scaffold_3: 11514137-11525594 Capsella rubella
Carub.0003s2809 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 11514137-11524136 Capsella rubella
Carub.0003s2809 10.0kb downstream 10.0kb downstream 11458 true scaffold_3: 11524137-11535594 Capsella rubella
Carub.0003s2809 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 11525595-11535594 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122336239 5261 Brassicaceae Singleton cluster - no MSA
123776964 5264 Brassicales-Malvales Singleton cluster - no MSA
124275342 5266 SBM Singleton cluster - no MSA
124130732 5268 Malvidae Singleton cluster - no MSA
124042461 5270 Rosid View MSA
123744234 5271 Pentapetalae View MSA
122796569 5272 Eudicot View MSA
122043980 5273 Angiosperm View MSA
121350842 5274 Embryophyte View MSA
123428088 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain