Gene : Carub.0003s2115 C. rubella v1.1
Defline:  (1 of 2) PTHR31288//PTHR31288:SF5 - FAMILY NOT NAMED // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MXL8-RELATED Genomic Order:  2115
Name:  ? Carub.0003s2115 Secondary Identifier:  ? PAC:39242547
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2115 0.5kb upstream 0.5kb upstream 2948 true scaffold_3: 7620980-7623927 Capsella rubella
Carub.0003s2115 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 7623428-7623927 Capsella rubella
Carub.0003s2115 0.5kb downstream 0.5kb downstream 2948 true scaffold_3: 7620480-7623427 Capsella rubella
Carub.0003s2115 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 7620480-7620979 Capsella rubella
Carub.0003s2115 1.0kb upstream 1.0kb upstream 3448 true scaffold_3: 7620980-7624427 Capsella rubella
Carub.0003s2115 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 7623428-7624427 Capsella rubella
Carub.0003s2115 1.0kb downstream 1.0kb downstream 3448 true scaffold_3: 7619980-7623427 Capsella rubella
Carub.0003s2115 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 7619980-7620979 Capsella rubella
Carub.0003s2115 2.0kb upstream 2.0kb upstream 4448 true scaffold_3: 7620980-7625427 Capsella rubella
Carub.0003s2115 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 7623428-7625427 Capsella rubella
Carub.0003s2115 2.0kb downstream 2.0kb downstream 4448 true scaffold_3: 7618980-7623427 Capsella rubella
Carub.0003s2115 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 7618980-7620979 Capsella rubella
Carub.0003s2115 5.0kb upstream 5.0kb upstream 7448 true scaffold_3: 7620980-7628427 Capsella rubella
Carub.0003s2115 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 7623428-7628427 Capsella rubella
Carub.0003s2115 5.0kb downstream 5.0kb downstream 7448 true scaffold_3: 7615980-7623427 Capsella rubella
Carub.0003s2115 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 7615980-7620979 Capsella rubella
Carub.0003s2115 10.0kb upstream 10.0kb upstream 12448 true scaffold_3: 7620980-7633427 Capsella rubella
Carub.0003s2115 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 7623428-7633427 Capsella rubella
Carub.0003s2115 10.0kb downstream 10.0kb downstream 12448 true scaffold_3: 7610980-7623427 Capsella rubella
Carub.0003s2115 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 7610980-7620979 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041437 5273 Angiosperm View MSA
122378918 5261 Brassicaceae View MSA
123837484 5264 Brassicales-Malvales View MSA
124346033 5266 SBM View MSA
124238517 5268 Malvidae View MSA
124067612 5270 Rosid View MSA
123741790 5271 Pentapetalae View MSA
122786128 5272 Eudicot View MSA
121350497 5274 Embryophyte View MSA
123381757 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain