Gene : Carub.0003s2122 C. rubella v1.1
Defline:  (1 of 2) PTHR24223//PTHR24223:SF108 - FAMILY NOT NAMED // ABC TRANSPORTER C FAMILY MEMBER 8 Genomic Order:  2122
Name:  ? Carub.0003s2122 Secondary Identifier:  ? PAC:39239744
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2122 0.5kb upstream 0.5kb upstream 6824 true scaffold_3: 7650656-7657479 Capsella rubella
Carub.0003s2122 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 7656980-7657479 Capsella rubella
Carub.0003s2122 0.5kb downstream 0.5kb downstream 6824 true scaffold_3: 7650156-7656979 Capsella rubella
Carub.0003s2122 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 7650156-7650655 Capsella rubella
Carub.0003s2122 1.0kb upstream 1.0kb upstream 7324 true scaffold_3: 7650656-7657979 Capsella rubella
Carub.0003s2122 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 7656980-7657979 Capsella rubella
Carub.0003s2122 1.0kb downstream 1.0kb downstream 7324 true scaffold_3: 7649656-7656979 Capsella rubella
Carub.0003s2122 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 7649656-7650655 Capsella rubella
Carub.0003s2122 2.0kb upstream 2.0kb upstream 8324 true scaffold_3: 7650656-7658979 Capsella rubella
Carub.0003s2122 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 7656980-7658979 Capsella rubella
Carub.0003s2122 2.0kb downstream 2.0kb downstream 8324 true scaffold_3: 7648656-7656979 Capsella rubella
Carub.0003s2122 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 7648656-7650655 Capsella rubella
Carub.0003s2122 5.0kb upstream 5.0kb upstream 11324 true scaffold_3: 7650656-7661979 Capsella rubella
Carub.0003s2122 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 7656980-7661979 Capsella rubella
Carub.0003s2122 5.0kb downstream 5.0kb downstream 11324 true scaffold_3: 7645656-7656979 Capsella rubella
Carub.0003s2122 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 7645656-7650655 Capsella rubella
Carub.0003s2122 10.0kb upstream 10.0kb upstream 16324 true scaffold_3: 7650656-7666979 Capsella rubella
Carub.0003s2122 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 7656980-7666979 Capsella rubella
Carub.0003s2122 10.0kb downstream 10.0kb downstream 16324 true scaffold_3: 7640656-7656979 Capsella rubella
Carub.0003s2122 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 7640656-7650655 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122335989 5261 Brassicaceae Singleton cluster - no MSA
123776728 5264 Brassicales-Malvales Singleton cluster - no MSA
124275112 5266 SBM Singleton cluster - no MSA
124253023 5268 Malvidae View MSA
124065688 5270 Rosid View MSA
123749567 5271 Pentapetalae View MSA
122793261 5272 Eudicot View MSA
122043507 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121346879 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain