Gene : Carub.0003s2108 C. rubella v1.1
Defline:  (1 of 4) PTHR31717//PTHR31717:SF11 - FAMILY NOT NAMED // B-BOX TYPE ZINC FINGER-CONTAINING PROTEIN Genomic Order:  2108
Name:  ? Carub.0003s2108 Secondary Identifier:  ? PAC:39241988
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2108 0.5kb upstream 0.5kb upstream 1196 true scaffold_3: 7596627-7597822 Capsella rubella
Carub.0003s2108 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 7597323-7597822 Capsella rubella
Carub.0003s2108 0.5kb downstream 0.5kb downstream 1196 true scaffold_3: 7596127-7597322 Capsella rubella
Carub.0003s2108 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 7596127-7596626 Capsella rubella
Carub.0003s2108 1.0kb upstream 1.0kb upstream 1696 true scaffold_3: 7596627-7598322 Capsella rubella
Carub.0003s2108 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 7597323-7598322 Capsella rubella
Carub.0003s2108 1.0kb downstream 1.0kb downstream 1696 true scaffold_3: 7595627-7597322 Capsella rubella
Carub.0003s2108 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 7595627-7596626 Capsella rubella
Carub.0003s2108 2.0kb upstream 2.0kb upstream 2696 true scaffold_3: 7596627-7599322 Capsella rubella
Carub.0003s2108 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 7597323-7599322 Capsella rubella
Carub.0003s2108 2.0kb downstream 2.0kb downstream 2696 true scaffold_3: 7594627-7597322 Capsella rubella
Carub.0003s2108 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 7594627-7596626 Capsella rubella
Carub.0003s2108 5.0kb upstream 5.0kb upstream 5696 true scaffold_3: 7596627-7602322 Capsella rubella
Carub.0003s2108 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 7597323-7602322 Capsella rubella
Carub.0003s2108 5.0kb downstream 5.0kb downstream 5696 true scaffold_3: 7591627-7597322 Capsella rubella
Carub.0003s2108 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 7591627-7596626 Capsella rubella
Carub.0003s2108 10.0kb upstream 10.0kb upstream 10696 true scaffold_3: 7596627-7607322 Capsella rubella
Carub.0003s2108 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 7597323-7607322 Capsella rubella
Carub.0003s2108 10.0kb downstream 10.0kb downstream 10696 true scaffold_3: 7586627-7597322 Capsella rubella
Carub.0003s2108 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 7586627-7596626 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378186 5261 Brassicaceae View MSA
123801776 5264 Brassicales-Malvales View MSA
124338419 5266 SBM View MSA
124239620 5268 Malvidae View MSA
124063198 5270 Rosid View MSA
123748974 5271 Pentapetalae View MSA
122796617 5272 Eudicot View MSA
122047832 5273 Angiosperm View MSA
121350092 5274 Embryophyte View MSA
123381576 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain