Gene : Carub.0003s2359 C. rubella v1.1

Defline:  (1 of 4) PTHR11909//PTHR11909:SF178 - CASEIN KINASE-RELATED // CASEIN KINASE 1-LIKE PROTEIN 8 Genomic Order:  2359
Name:  ? Carub.0003s2359 Secondary Identifier:  ? PAC:39242699

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2359 0.5kb upstream 0.5kb upstream 4212 true scaffold_3: 8602183-8606394 Capsella rubella
Carub.0003s2359 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 8602183-8602682 Capsella rubella
Carub.0003s2359 0.5kb downstream 0.5kb downstream 4212 true scaffold_3: 8602683-8606894 Capsella rubella
Carub.0003s2359 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 8606395-8606894 Capsella rubella
Carub.0003s2359 1.0kb upstream 1.0kb upstream 4712 true scaffold_3: 8601683-8606394 Capsella rubella
Carub.0003s2359 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 8601683-8602682 Capsella rubella
Carub.0003s2359 1.0kb downstream 1.0kb downstream 4712 true scaffold_3: 8602683-8607394 Capsella rubella
Carub.0003s2359 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 8606395-8607394 Capsella rubella
Carub.0003s2359 2.0kb upstream 2.0kb upstream 5712 true scaffold_3: 8600683-8606394 Capsella rubella
Carub.0003s2359 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 8600683-8602682 Capsella rubella
Carub.0003s2359 2.0kb downstream 2.0kb downstream 5712 true scaffold_3: 8602683-8608394 Capsella rubella
Carub.0003s2359 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 8606395-8608394 Capsella rubella
Carub.0003s2359 5.0kb upstream 5.0kb upstream 8712 true scaffold_3: 8597683-8606394 Capsella rubella
Carub.0003s2359 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 8597683-8602682 Capsella rubella
Carub.0003s2359 5.0kb downstream 5.0kb downstream 8712 true scaffold_3: 8602683-8611394 Capsella rubella
Carub.0003s2359 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 8606395-8611394 Capsella rubella
Carub.0003s2359 10.0kb upstream 10.0kb upstream 13712 true scaffold_3: 8592683-8606394 Capsella rubella
Carub.0003s2359 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 8592683-8602682 Capsella rubella
Carub.0003s2359 10.0kb downstream 10.0kb downstream 13712 true scaffold_3: 8602683-8616394 Capsella rubella
Carub.0003s2359 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 8606395-8616394 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366303 5261 Brassicaceae View MSA
123799146 5264 Brassicales-Malvales View MSA
124296695 5266 SBM View MSA
124148773 5268 Malvidae View MSA
124074608 5270 Rosid View MSA
123745824 5271 Pentapetalae View MSA
122787812 5272 Eudicot View MSA
122045812 5273 Angiosperm View MSA
121310507 5274 Embryophyte View MSA
123427595 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain