Gene : Carub.0003s2352 C. rubella v1.1
Defline:  (1 of 4) PTHR31165//PTHR31165:SF13 - FAMILY NOT NAMED // PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-RELATED Genomic Order:  2352
Name:  ? Carub.0003s2352 Secondary Identifier:  ? PAC:39242551
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2352 0.5kb upstream 0.5kb upstream 1935 true scaffold_3: 8574907-8576841 Capsella rubella
Carub.0003s2352 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 8574907-8575406 Capsella rubella
Carub.0003s2352 0.5kb downstream 0.5kb downstream 1935 true scaffold_3: 8575407-8577341 Capsella rubella
Carub.0003s2352 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 8576842-8577341 Capsella rubella
Carub.0003s2352 1.0kb upstream 1.0kb upstream 2435 true scaffold_3: 8574407-8576841 Capsella rubella
Carub.0003s2352 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 8574407-8575406 Capsella rubella
Carub.0003s2352 1.0kb downstream 1.0kb downstream 2435 true scaffold_3: 8575407-8577841 Capsella rubella
Carub.0003s2352 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 8576842-8577841 Capsella rubella
Carub.0003s2352 2.0kb upstream 2.0kb upstream 3435 true scaffold_3: 8573407-8576841 Capsella rubella
Carub.0003s2352 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 8573407-8575406 Capsella rubella
Carub.0003s2352 2.0kb downstream 2.0kb downstream 3435 true scaffold_3: 8575407-8578841 Capsella rubella
Carub.0003s2352 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 8576842-8578841 Capsella rubella
Carub.0003s2352 5.0kb upstream 5.0kb upstream 6435 true scaffold_3: 8570407-8576841 Capsella rubella
Carub.0003s2352 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 8570407-8575406 Capsella rubella
Carub.0003s2352 5.0kb downstream 5.0kb downstream 6435 true scaffold_3: 8575407-8581841 Capsella rubella
Carub.0003s2352 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 8576842-8581841 Capsella rubella
Carub.0003s2352 10.0kb upstream 10.0kb upstream 11435 true scaffold_3: 8565407-8576841 Capsella rubella
Carub.0003s2352 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 8565407-8575406 Capsella rubella
Carub.0003s2352 10.0kb downstream 10.0kb downstream 11435 true scaffold_3: 8575407-8586841 Capsella rubella
Carub.0003s2352 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 8576842-8586841 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373733 5261 Brassicaceae View MSA
123839576 5264 Brassicales-Malvales View MSA
124351624 5266 SBM View MSA
124253434 5268 Malvidae View MSA
124071658 5270 Rosid View MSA
123753170 5271 Pentapetalae View MSA
122789282 5272 Eudicot View MSA
122049887 5273 Angiosperm View MSA
121351474 5274 Embryophyte View MSA
123382179 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain