Gene : Carub.0003s2371 C. rubella v1.1
Defline:  (1 of 2) 2.1.1.79 - Cyclopropane-fatty-acyl-phospholipid synthase / Unsaturated-phospholipid methyltransferase Genomic Order:  2371
Name:  ? Carub.0003s2371 Secondary Identifier:  ? PAC:39242083
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-4942 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2371 0.5kb upstream 0.5kb upstream 3010 true scaffold_3: 8664048-8667057 Capsella rubella
Carub.0003s2371 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 8664048-8664547 Capsella rubella
Carub.0003s2371 0.5kb downstream 0.5kb downstream 3010 true scaffold_3: 8664548-8667557 Capsella rubella
Carub.0003s2371 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 8667058-8667557 Capsella rubella
Carub.0003s2371 1.0kb upstream 1.0kb upstream 3510 true scaffold_3: 8663548-8667057 Capsella rubella
Carub.0003s2371 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 8663548-8664547 Capsella rubella
Carub.0003s2371 1.0kb downstream 1.0kb downstream 3510 true scaffold_3: 8664548-8668057 Capsella rubella
Carub.0003s2371 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 8667058-8668057 Capsella rubella
Carub.0003s2371 2.0kb upstream 2.0kb upstream 4510 true scaffold_3: 8662548-8667057 Capsella rubella
Carub.0003s2371 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 8662548-8664547 Capsella rubella
Carub.0003s2371 2.0kb downstream 2.0kb downstream 4510 true scaffold_3: 8664548-8669057 Capsella rubella
Carub.0003s2371 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 8667058-8669057 Capsella rubella
Carub.0003s2371 5.0kb upstream 5.0kb upstream 7510 true scaffold_3: 8659548-8667057 Capsella rubella
Carub.0003s2371 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 8659548-8664547 Capsella rubella
Carub.0003s2371 5.0kb downstream 5.0kb downstream 7510 true scaffold_3: 8664548-8672057 Capsella rubella
Carub.0003s2371 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 8667058-8672057 Capsella rubella
Carub.0003s2371 10.0kb upstream 10.0kb upstream 12510 true scaffold_3: 8654548-8667057 Capsella rubella
Carub.0003s2371 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 8654548-8664547 Capsella rubella
Carub.0003s2371 10.0kb downstream 10.0kb downstream 12510 true scaffold_3: 8664548-8677057 Capsella rubella
Carub.0003s2371 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 8667058-8677057 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378227 5261 Brassicaceae View MSA
123836708 5264 Brassicales-Malvales View MSA
124347136 5266 SBM View MSA
124247291 5268 Malvidae View MSA
124064151 5270 Rosid View MSA
123753526 5271 Pentapetalae View MSA
122793663 5272 Eudicot View MSA
122044798 5273 Angiosperm View MSA
121344638 5274 Embryophyte View MSA
123426651 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain