Gene : Carub.0003s2417 C. rubella v1.1
Defline:  (1 of 2) PTHR12570//PTHR12570:SF20 - UNCHARACTERIZED // GENOMIC DNA, CHROMOSOME 3, BAC CLONE:F14O13 Genomic Order:  2417
Name:  ? Carub.0003s2417 Secondary Identifier:  ? PAC:39239587
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2417 0.5kb upstream 0.5kb upstream 3326 true scaffold_3: 8887426-8890751 Capsella rubella
Carub.0003s2417 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 8887426-8887925 Capsella rubella
Carub.0003s2417 0.5kb downstream 0.5kb downstream 3326 true scaffold_3: 8887926-8891251 Capsella rubella
Carub.0003s2417 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 8890752-8891251 Capsella rubella
Carub.0003s2417 1.0kb upstream 1.0kb upstream 3826 true scaffold_3: 8886926-8890751 Capsella rubella
Carub.0003s2417 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 8886926-8887925 Capsella rubella
Carub.0003s2417 1.0kb downstream 1.0kb downstream 3826 true scaffold_3: 8887926-8891751 Capsella rubella
Carub.0003s2417 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 8890752-8891751 Capsella rubella
Carub.0003s2417 2.0kb upstream 2.0kb upstream 4826 true scaffold_3: 8885926-8890751 Capsella rubella
Carub.0003s2417 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 8885926-8887925 Capsella rubella
Carub.0003s2417 2.0kb downstream 2.0kb downstream 4826 true scaffold_3: 8887926-8892751 Capsella rubella
Carub.0003s2417 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 8890752-8892751 Capsella rubella
Carub.0003s2417 5.0kb upstream 5.0kb upstream 7826 true scaffold_3: 8882926-8890751 Capsella rubella
Carub.0003s2417 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 8882926-8887925 Capsella rubella
Carub.0003s2417 5.0kb downstream 5.0kb downstream 7826 true scaffold_3: 8887926-8895751 Capsella rubella
Carub.0003s2417 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 8890752-8895751 Capsella rubella
Carub.0003s2417 10.0kb upstream 10.0kb upstream 12826 true scaffold_3: 8877926-8890751 Capsella rubella
Carub.0003s2417 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 8877926-8887925 Capsella rubella
Carub.0003s2417 10.0kb downstream 10.0kb downstream 12826 true scaffold_3: 8887926-8900751 Capsella rubella
Carub.0003s2417 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 8890752-8900751 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376670 5261 Brassicaceae View MSA
123838674 5264 Brassicales-Malvales View MSA
124339897 5266 SBM View MSA
124248760 5268 Malvidae View MSA
124075521 5270 Rosid View MSA
123745073 5271 Pentapetalae View MSA
122789394 5272 Eudicot View MSA
122049852 5273 Angiosperm View MSA
121350958 5274 Embryophyte View MSA
123428746 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain