Gene : Carub.0003s1941 C. rubella v1.1
Defline:  (1 of 2) PTHR31807:SF4 - PROTEIN SNOWY COTYLEDON 3-RELATED Genomic Order:  1941
Name:  ? Carub.0003s1941 Secondary Identifier:  ? PAC:39240646
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1941 0.5kb upstream 0.5kb upstream 4660 true scaffold_3: 6966156-6970815 Capsella rubella
Carub.0003s1941 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 6966156-6966655 Capsella rubella
Carub.0003s1941 0.5kb downstream 0.5kb downstream 4660 true scaffold_3: 6966656-6971315 Capsella rubella
Carub.0003s1941 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 6970816-6971315 Capsella rubella
Carub.0003s1941 1.0kb upstream 1.0kb upstream 5160 true scaffold_3: 6965656-6970815 Capsella rubella
Carub.0003s1941 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 6965656-6966655 Capsella rubella
Carub.0003s1941 1.0kb downstream 1.0kb downstream 5160 true scaffold_3: 6966656-6971815 Capsella rubella
Carub.0003s1941 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 6970816-6971815 Capsella rubella
Carub.0003s1941 2.0kb upstream 2.0kb upstream 6160 true scaffold_3: 6964656-6970815 Capsella rubella
Carub.0003s1941 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 6964656-6966655 Capsella rubella
Carub.0003s1941 2.0kb downstream 2.0kb downstream 6160 true scaffold_3: 6966656-6972815 Capsella rubella
Carub.0003s1941 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 6970816-6972815 Capsella rubella
Carub.0003s1941 5.0kb upstream 5.0kb upstream 9160 true scaffold_3: 6961656-6970815 Capsella rubella
Carub.0003s1941 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 6961656-6966655 Capsella rubella
Carub.0003s1941 5.0kb downstream 5.0kb downstream 9160 true scaffold_3: 6966656-6975815 Capsella rubella
Carub.0003s1941 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 6970816-6975815 Capsella rubella
Carub.0003s1941 10.0kb upstream 10.0kb upstream 14160 true scaffold_3: 6956656-6970815 Capsella rubella
Carub.0003s1941 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 6956656-6966655 Capsella rubella
Carub.0003s1941 10.0kb downstream 10.0kb downstream 14160 true scaffold_3: 6966656-6980815 Capsella rubella
Carub.0003s1941 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 6970816-6980815 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368125 5261 Brassicaceae View MSA
123799496 5264 Brassicales-Malvales View MSA
124297011 5266 SBM View MSA
124149010 5268 Malvidae View MSA
124065184 5270 Rosid View MSA
123747124 5271 Pentapetalae View MSA
122796341 5272 Eudicot View MSA
122044458 5273 Angiosperm View MSA
121348675 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain