Gene : Carub.0003s1947 C. rubella v1.1
Defline:  (1 of 7) PF06075 - Plant protein of unknown function (DUF936) (DUF936) Genomic Order:  1947
Name:  ? Carub.0003s1947 Secondary Identifier:  ? PAC:39240518
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1947 0.5kb upstream 0.5kb upstream 2643 true scaffold_3: 6984217-6986859 Capsella rubella
Carub.0003s1947 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 6986360-6986859 Capsella rubella
Carub.0003s1947 0.5kb downstream 0.5kb downstream 2643 true scaffold_3: 6983717-6986359 Capsella rubella
Carub.0003s1947 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 6983717-6984216 Capsella rubella
Carub.0003s1947 1.0kb upstream 1.0kb upstream 3143 true scaffold_3: 6984217-6987359 Capsella rubella
Carub.0003s1947 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 6986360-6987359 Capsella rubella
Carub.0003s1947 1.0kb downstream 1.0kb downstream 3143 true scaffold_3: 6983217-6986359 Capsella rubella
Carub.0003s1947 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 6983217-6984216 Capsella rubella
Carub.0003s1947 2.0kb upstream 2.0kb upstream 4143 true scaffold_3: 6984217-6988359 Capsella rubella
Carub.0003s1947 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 6986360-6988359 Capsella rubella
Carub.0003s1947 2.0kb downstream 2.0kb downstream 4143 true scaffold_3: 6982217-6986359 Capsella rubella
Carub.0003s1947 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 6982217-6984216 Capsella rubella
Carub.0003s1947 5.0kb upstream 5.0kb upstream 7143 true scaffold_3: 6984217-6991359 Capsella rubella
Carub.0003s1947 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 6986360-6991359 Capsella rubella
Carub.0003s1947 5.0kb downstream 5.0kb downstream 7143 true scaffold_3: 6979217-6986359 Capsella rubella
Carub.0003s1947 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 6979217-6984216 Capsella rubella
Carub.0003s1947 10.0kb upstream 10.0kb upstream 12143 true scaffold_3: 6984217-6996359 Capsella rubella
Carub.0003s1947 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 6986360-6996359 Capsella rubella
Carub.0003s1947 10.0kb downstream 10.0kb downstream 12143 true scaffold_3: 6974217-6986359 Capsella rubella
Carub.0003s1947 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 6974217-6984216 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360725 5261 Brassicaceae View MSA
123834932 5264 Brassicales-Malvales View MSA
124343911 5266 SBM View MSA
124247217 5268 Malvidae View MSA
124064084 5270 Rosid View MSA
123740426 5271 Pentapetalae View MSA
122786912 5272 Eudicot View MSA
122043285 5273 Angiosperm View MSA
121350805 5274 Embryophyte View MSA
123381891 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain