Gene : Carub.0003s2485 C. rubella v1.1
Defline:  (1 of 4) PTHR13789//PTHR13789:SF185 - MONOOXYGENASE // FAD/NAD(P)-BINDING OXIDOREDUCTASE FAMILY PROTEIN Genomic Order:  2485
Name:  ? Carub.0003s2485 Secondary Identifier:  ? PAC:39239198
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2485 0.5kb upstream 0.5kb upstream 2355 true scaffold_3: 9224817-9227171 Capsella rubella
Carub.0003s2485 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 9226672-9227171 Capsella rubella
Carub.0003s2485 0.5kb downstream 0.5kb downstream 2355 true scaffold_3: 9224317-9226671 Capsella rubella
Carub.0003s2485 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 9224317-9224816 Capsella rubella
Carub.0003s2485 1.0kb upstream 1.0kb upstream 2855 true scaffold_3: 9224817-9227671 Capsella rubella
Carub.0003s2485 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 9226672-9227671 Capsella rubella
Carub.0003s2485 1.0kb downstream 1.0kb downstream 2855 true scaffold_3: 9223817-9226671 Capsella rubella
Carub.0003s2485 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 9223817-9224816 Capsella rubella
Carub.0003s2485 2.0kb upstream 2.0kb upstream 3855 true scaffold_3: 9224817-9228671 Capsella rubella
Carub.0003s2485 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 9226672-9228671 Capsella rubella
Carub.0003s2485 2.0kb downstream 2.0kb downstream 3855 true scaffold_3: 9222817-9226671 Capsella rubella
Carub.0003s2485 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 9222817-9224816 Capsella rubella
Carub.0003s2485 5.0kb upstream 5.0kb upstream 6855 true scaffold_3: 9224817-9231671 Capsella rubella
Carub.0003s2485 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 9226672-9231671 Capsella rubella
Carub.0003s2485 5.0kb downstream 5.0kb downstream 6855 true scaffold_3: 9219817-9226671 Capsella rubella
Carub.0003s2485 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 9219817-9224816 Capsella rubella
Carub.0003s2485 10.0kb upstream 10.0kb upstream 11855 true scaffold_3: 9224817-9236671 Capsella rubella
Carub.0003s2485 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 9226672-9236671 Capsella rubella
Carub.0003s2485 10.0kb downstream 10.0kb downstream 11855 true scaffold_3: 9214817-9226671 Capsella rubella
Carub.0003s2485 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 9214817-9224816 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122335935 5261 Brassicaceae Singleton cluster - no MSA
123776680 5264 Brassicales-Malvales Singleton cluster - no MSA
124275065 5266 SBM Singleton cluster - no MSA
124256563 5268 Malvidae View MSA
124052422 5270 Rosid View MSA
123750629 5271 Pentapetalae View MSA
122796430 5272 Eudicot View MSA
122051519 5273 Angiosperm View MSA
123429089 5275 Viridiplantae View MSA
121349985 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain