Gene : Carub.0003s1969 C. rubella v1.1
Defline:  (1 of 2) PF02620 - Uncharacterized ACR, COG1399 (DUF177) Genomic Order:  1969
Name:  ? Carub.0003s1969 Secondary Identifier:  ? PAC:39239758
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1969 0.5kb upstream 0.5kb upstream 2341 true scaffold_3: 7053673-7056013 Capsella rubella
Carub.0003s1969 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 7055514-7056013 Capsella rubella
Carub.0003s1969 0.5kb downstream 0.5kb downstream 2341 true scaffold_3: 7053173-7055513 Capsella rubella
Carub.0003s1969 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 7053173-7053672 Capsella rubella
Carub.0003s1969 1.0kb upstream 1.0kb upstream 2841 true scaffold_3: 7053673-7056513 Capsella rubella
Carub.0003s1969 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 7055514-7056513 Capsella rubella
Carub.0003s1969 1.0kb downstream 1.0kb downstream 2841 true scaffold_3: 7052673-7055513 Capsella rubella
Carub.0003s1969 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 7052673-7053672 Capsella rubella
Carub.0003s1969 2.0kb upstream 2.0kb upstream 3841 true scaffold_3: 7053673-7057513 Capsella rubella
Carub.0003s1969 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 7055514-7057513 Capsella rubella
Carub.0003s1969 2.0kb downstream 2.0kb downstream 3841 true scaffold_3: 7051673-7055513 Capsella rubella
Carub.0003s1969 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 7051673-7053672 Capsella rubella
Carub.0003s1969 5.0kb upstream 5.0kb upstream 6841 true scaffold_3: 7053673-7060513 Capsella rubella
Carub.0003s1969 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 7055514-7060513 Capsella rubella
Carub.0003s1969 5.0kb downstream 5.0kb downstream 6841 true scaffold_3: 7048673-7055513 Capsella rubella
Carub.0003s1969 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 7048673-7053672 Capsella rubella
Carub.0003s1969 10.0kb upstream 10.0kb upstream 11841 true scaffold_3: 7053673-7065513 Capsella rubella
Carub.0003s1969 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 7055514-7065513 Capsella rubella
Carub.0003s1969 10.0kb downstream 10.0kb downstream 11841 true scaffold_3: 7043673-7055513 Capsella rubella
Carub.0003s1969 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 7043673-7053672 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376572 5261 Brassicaceae View MSA
123832004 5264 Brassicales-Malvales View MSA
124341943 5266 SBM View MSA
124240082 5268 Malvidae View MSA
124062626 5270 Rosid View MSA
123736683 5271 Pentapetalae View MSA
122787330 5272 Eudicot View MSA
122051135 5273 Angiosperm View MSA
121345181 5274 Embryophyte View MSA
123380171 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain