Gene : Carub.0003s1968 C. rubella v1.1
Defline:  (1 of 2) PF02620 - Uncharacterized ACR, COG1399 (DUF177) Genomic Order:  1968
Name:  ? Carub.0003s1968 Secondary Identifier:  ? PAC:39240868
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1968 0.5kb upstream 0.5kb upstream 2078 true scaffold_3: 7051549-7053626 Capsella rubella
Carub.0003s1968 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 7051549-7052048 Capsella rubella
Carub.0003s1968 0.5kb downstream 0.5kb downstream 2078 true scaffold_3: 7052049-7054126 Capsella rubella
Carub.0003s1968 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 7053627-7054126 Capsella rubella
Carub.0003s1968 1.0kb upstream 1.0kb upstream 2578 true scaffold_3: 7051049-7053626 Capsella rubella
Carub.0003s1968 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 7051049-7052048 Capsella rubella
Carub.0003s1968 1.0kb downstream 1.0kb downstream 2578 true scaffold_3: 7052049-7054626 Capsella rubella
Carub.0003s1968 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 7053627-7054626 Capsella rubella
Carub.0003s1968 2.0kb upstream 2.0kb upstream 3578 true scaffold_3: 7050049-7053626 Capsella rubella
Carub.0003s1968 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 7050049-7052048 Capsella rubella
Carub.0003s1968 2.0kb downstream 2.0kb downstream 3578 true scaffold_3: 7052049-7055626 Capsella rubella
Carub.0003s1968 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 7053627-7055626 Capsella rubella
Carub.0003s1968 5.0kb upstream 5.0kb upstream 6578 true scaffold_3: 7047049-7053626 Capsella rubella
Carub.0003s1968 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 7047049-7052048 Capsella rubella
Carub.0003s1968 5.0kb downstream 5.0kb downstream 6578 true scaffold_3: 7052049-7058626 Capsella rubella
Carub.0003s1968 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 7053627-7058626 Capsella rubella
Carub.0003s1968 10.0kb upstream 10.0kb upstream 11578 true scaffold_3: 7042049-7053626 Capsella rubella
Carub.0003s1968 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 7042049-7052048 Capsella rubella
Carub.0003s1968 10.0kb downstream 10.0kb downstream 11578 true scaffold_3: 7052049-7063626 Capsella rubella
Carub.0003s1968 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 7053627-7063626 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026421 5273 Angiosperm View MSA
122363333 5261 Brassicaceae View MSA
123828445 5264 Brassicales-Malvales View MSA
124338124 5266 SBM View MSA
124253101 5268 Malvidae View MSA
124066454 5270 Rosid View MSA
123747479 5271 Pentapetalae View MSA
122790250 5272 Eudicot View MSA
121347098 5274 Embryophyte View MSA
123380492 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain