Gene : Carub.0003s2033 C. rubella v1.1
Defline:  (1 of 1) 3.5.99.10 - 2-iminobutanoate/2-iminopropanoate deaminase / Enamine/imine deaminase Genomic Order:  2033
Name:  ? Carub.0003s2033 Secondary Identifier:  ? PAC:39242930
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella LCYSDEG-PWY Capsella rubella pathologic  
Crubella PWY0-1535 Capsella rubella pathologic  
Crubella PWY-6196 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2033 0.5kb upstream 0.5kb upstream 2284 true scaffold_3: 7287108-7289391 Capsella rubella
Carub.0003s2033 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 7288892-7289391 Capsella rubella
Carub.0003s2033 0.5kb downstream 0.5kb downstream 2284 true scaffold_3: 7286608-7288891 Capsella rubella
Carub.0003s2033 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 7286608-7287107 Capsella rubella
Carub.0003s2033 1.0kb upstream 1.0kb upstream 2784 true scaffold_3: 7287108-7289891 Capsella rubella
Carub.0003s2033 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 7288892-7289891 Capsella rubella
Carub.0003s2033 1.0kb downstream 1.0kb downstream 2784 true scaffold_3: 7286108-7288891 Capsella rubella
Carub.0003s2033 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 7286108-7287107 Capsella rubella
Carub.0003s2033 2.0kb upstream 2.0kb upstream 3784 true scaffold_3: 7287108-7290891 Capsella rubella
Carub.0003s2033 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 7288892-7290891 Capsella rubella
Carub.0003s2033 2.0kb downstream 2.0kb downstream 3784 true scaffold_3: 7285108-7288891 Capsella rubella
Carub.0003s2033 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 7285108-7287107 Capsella rubella
Carub.0003s2033 5.0kb upstream 5.0kb upstream 6784 true scaffold_3: 7287108-7293891 Capsella rubella
Carub.0003s2033 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 7288892-7293891 Capsella rubella
Carub.0003s2033 5.0kb downstream 5.0kb downstream 6784 true scaffold_3: 7282108-7288891 Capsella rubella
Carub.0003s2033 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 7282108-7287107 Capsella rubella
Carub.0003s2033 10.0kb upstream 10.0kb upstream 11784 true scaffold_3: 7287108-7298891 Capsella rubella
Carub.0003s2033 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 7288892-7298891 Capsella rubella
Carub.0003s2033 10.0kb downstream 10.0kb downstream 11784 true scaffold_3: 7277108-7288891 Capsella rubella
Carub.0003s2033 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 7277108-7287107 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364507 5261 Brassicaceae View MSA
123828013 5264 Brassicales-Malvales View MSA
124338770 5266 SBM View MSA
124244938 5268 Malvidae View MSA
124062452 5270 Rosid View MSA
123747425 5271 Pentapetalae View MSA
122788697 5272 Eudicot View MSA
122047773 5273 Angiosperm View MSA
121349412 5274 Embryophyte View MSA
123426885 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain