Gene : Carub.0003s2028 C. rubella v1.1
Defline:  (1 of 1) 2.1.3.2 - Aspartate carbamoyltransferase / Carbamylaspartotranskinase Genomic Order:  2028
Name:  ? Carub.0003s2028 Secondary Identifier:  ? PAC:39242731
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY0-162 Capsella rubella pathologic  
Crubella PWY-5686 Capsella rubella pathologic  
Crubella PWY-7211 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s2028 0.5kb upstream 0.5kb upstream 2828 true scaffold_3: 7272081-7274908 Capsella rubella
Carub.0003s2028 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 7274409-7274908 Capsella rubella
Carub.0003s2028 0.5kb downstream 0.5kb downstream 2828 true scaffold_3: 7271581-7274408 Capsella rubella
Carub.0003s2028 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 7271581-7272080 Capsella rubella
Carub.0003s2028 1.0kb upstream 1.0kb upstream 3328 true scaffold_3: 7272081-7275408 Capsella rubella
Carub.0003s2028 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 7274409-7275408 Capsella rubella
Carub.0003s2028 1.0kb downstream 1.0kb downstream 3328 true scaffold_3: 7271081-7274408 Capsella rubella
Carub.0003s2028 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 7271081-7272080 Capsella rubella
Carub.0003s2028 2.0kb upstream 2.0kb upstream 4328 true scaffold_3: 7272081-7276408 Capsella rubella
Carub.0003s2028 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 7274409-7276408 Capsella rubella
Carub.0003s2028 2.0kb downstream 2.0kb downstream 4328 true scaffold_3: 7270081-7274408 Capsella rubella
Carub.0003s2028 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 7270081-7272080 Capsella rubella
Carub.0003s2028 5.0kb upstream 5.0kb upstream 7328 true scaffold_3: 7272081-7279408 Capsella rubella
Carub.0003s2028 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 7274409-7279408 Capsella rubella
Carub.0003s2028 5.0kb downstream 5.0kb downstream 7328 true scaffold_3: 7267081-7274408 Capsella rubella
Carub.0003s2028 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 7267081-7272080 Capsella rubella
Carub.0003s2028 10.0kb upstream 10.0kb upstream 12328 true scaffold_3: 7272081-7284408 Capsella rubella
Carub.0003s2028 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 7274409-7284408 Capsella rubella
Carub.0003s2028 10.0kb downstream 10.0kb downstream 12328 true scaffold_3: 7262081-7274408 Capsella rubella
Carub.0003s2028 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 7262081-7272080 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361849 5261 Brassicaceae View MSA
123834078 5264 Brassicales-Malvales View MSA
124341674 5266 SBM View MSA
124240648 5268 Malvidae View MSA
124063971 5270 Rosid View MSA
123737455 5271 Pentapetalae View MSA
122791226 5272 Eudicot View MSA
122047002 5273 Angiosperm View MSA
121345349 5274 Embryophyte View MSA
123427161 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain