Gene : Carub.0003s1879 C. rubella v1.1
Defline:  (1 of 176) PF01535//PF13041 - PPR repeat (PPR) // PPR repeat family (PPR_2) Genomic Order:  1879
Name:  ? Carub.0003s1879 Secondary Identifier:  ? PAC:39239811
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1879 0.5kb upstream 0.5kb upstream 1925 true scaffold_3: 6677771-6679695 Capsella rubella
Carub.0003s1879 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 6679196-6679695 Capsella rubella
Carub.0003s1879 0.5kb downstream 0.5kb downstream 1925 true scaffold_3: 6677271-6679195 Capsella rubella
Carub.0003s1879 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 6677271-6677770 Capsella rubella
Carub.0003s1879 1.0kb upstream 1.0kb upstream 2425 true scaffold_3: 6677771-6680195 Capsella rubella
Carub.0003s1879 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 6679196-6680195 Capsella rubella
Carub.0003s1879 1.0kb downstream 1.0kb downstream 2425 true scaffold_3: 6676771-6679195 Capsella rubella
Carub.0003s1879 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 6676771-6677770 Capsella rubella
Carub.0003s1879 2.0kb upstream 2.0kb upstream 3425 true scaffold_3: 6677771-6681195 Capsella rubella
Carub.0003s1879 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 6679196-6681195 Capsella rubella
Carub.0003s1879 2.0kb downstream 2.0kb downstream 3425 true scaffold_3: 6675771-6679195 Capsella rubella
Carub.0003s1879 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 6675771-6677770 Capsella rubella
Carub.0003s1879 5.0kb upstream 5.0kb upstream 6425 true scaffold_3: 6677771-6684195 Capsella rubella
Carub.0003s1879 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 6679196-6684195 Capsella rubella
Carub.0003s1879 5.0kb downstream 5.0kb downstream 6425 true scaffold_3: 6672771-6679195 Capsella rubella
Carub.0003s1879 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 6672771-6677770 Capsella rubella
Carub.0003s1879 10.0kb upstream 10.0kb upstream 11425 true scaffold_3: 6677771-6689195 Capsella rubella
Carub.0003s1879 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 6679196-6689195 Capsella rubella
Carub.0003s1879 10.0kb downstream 10.0kb downstream 11425 true scaffold_3: 6667771-6679195 Capsella rubella
Carub.0003s1879 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 6667771-6677770 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362931 5261 Brassicaceae View MSA
123829830 5264 Brassicales-Malvales View MSA
124344349 5266 SBM View MSA
124244196 5268 Malvidae View MSA
124070101 5270 Rosid View MSA
123753779 5271 Pentapetalae View MSA
122797667 5272 Eudicot View MSA
122051669 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351733 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain