Gene : Carub.0003s1923 C. rubella v1.1
Defline:  (1 of 3) 3.1.3.67 - Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase / Phosphatidylinositol-3,4,5-trisphosphate 3-phosphohydrolase Genomic Order:  1923
Name:  ? Carub.0003s1923 Secondary Identifier:  ? PAC:39241605
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Crubella PWY-6368 Capsella rubella pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Carub.0003s1923 0.5kb upstream 0.5kb upstream 4960 true scaffold_3: 6888280-6893239 Capsella rubella
Carub.0003s1923 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 6888280-6888779 Capsella rubella
Carub.0003s1923 0.5kb downstream 0.5kb downstream 4960 true scaffold_3: 6888780-6893739 Capsella rubella
Carub.0003s1923 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 6893240-6893739 Capsella rubella
Carub.0003s1923 1.0kb upstream 1.0kb upstream 5460 true scaffold_3: 6887780-6893239 Capsella rubella
Carub.0003s1923 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 6887780-6888779 Capsella rubella
Carub.0003s1923 1.0kb downstream 1.0kb downstream 5460 true scaffold_3: 6888780-6894239 Capsella rubella
Carub.0003s1923 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 6893240-6894239 Capsella rubella
Carub.0003s1923 2.0kb upstream 2.0kb upstream 6460 true scaffold_3: 6886780-6893239 Capsella rubella
Carub.0003s1923 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 6886780-6888779 Capsella rubella
Carub.0003s1923 2.0kb downstream 2.0kb downstream 6460 true scaffold_3: 6888780-6895239 Capsella rubella
Carub.0003s1923 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 6893240-6895239 Capsella rubella
Carub.0003s1923 5.0kb upstream 5.0kb upstream 9460 true scaffold_3: 6883780-6893239 Capsella rubella
Carub.0003s1923 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 6883780-6888779 Capsella rubella
Carub.0003s1923 5.0kb downstream 5.0kb downstream 9460 true scaffold_3: 6888780-6898239 Capsella rubella
Carub.0003s1923 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 6893240-6898239 Capsella rubella
Carub.0003s1923 10.0kb upstream 10.0kb upstream 14460 true scaffold_3: 6878780-6893239 Capsella rubella
Carub.0003s1923 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 6878780-6888779 Capsella rubella
Carub.0003s1923 10.0kb downstream 10.0kb downstream 14460 true scaffold_3: 6888780-6903239 Capsella rubella
Carub.0003s1923 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 6893240-6903239 Capsella rubella

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373755 5261 Brassicaceae View MSA
123827784 5264 Brassicales-Malvales View MSA
124340082 5266 SBM View MSA
124236916 5268 Malvidae View MSA
124064692 5270 Rosid View MSA
123751373 5271 Pentapetalae View MSA
122789391 5272 Eudicot View MSA
122043545 5273 Angiosperm View MSA
121345255 5274 Embryophyte View MSA
123428601 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain